Porphyromonas gingivalis W83: PG_1038
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Entry
PG_1038 CDS
T00145
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA/Rep Family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pgi
Porphyromonas gingivalis W83
Pathway
pgi03420
Nucleotide excision repair
pgi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PG_1038
03430 Mismatch repair
PG_1038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgi03400
]
PG_1038
Enzymes [BR:
pgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PG_1038
DNA repair and recombination proteins [BR:
pgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PG_1038
MMR (mismatch excision repair)
Other MMR factors
PG_1038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
CarD_TRCF_RID
ATV_ORF273
Motif
Other DBs
NCBI-ProteinID:
AAQ66157
UniProt:
Q7MAW3
LinkDB
All DBs
Position
1102884..1105181
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AA seq
765 aa
AA seq
DB search
MSEDYLSSLNDSQKAAVLYNDGPALVIAGAGSGKTRVLVYKLLHLIHSGYDPARLMALTF
TNKAAKEMKERVASEIGPAAYRIQMGTFHSVFSRILRENATHLGYTRDFSIYDTNDTKSL
LRHVMKRMNIDDKVYRLNAVQHRISMAKNQLISPESYAANKDLSRYDIDCRMPRMAEIYS
LYTILCKQNNAMDFDDLLFKINVLFRDFPDVLQTYRDRIDYLLIDEYQDTNFAQYLIARQ
LMGEKGKVFVVGDDAQSIYSFRGAKVENILGFSKSFPGSKLFKLEENYRSTQSIVNAANS
LIAHNEGRIPKQVFSNKQVGERIRLTGCLSGYLEAYTVADSIVERRMQEHCPYSDFAILY
RTNAQSRVFEEALRKHNIPFRIYGGLSFYSRKEIKDVLAYFRLIVNPNDDEALRRVINYP
KRGIGDTTLSRLNEIATASSRSLWDVLSESQKGLPDLSATARRRLGEFVSLIRELQESEY
ESLYEQAADVVKRSGISAEIFSDKSIEGISRQENLKELLNGIEEYGTSYAEERGEKPSLG
TFLNEVVLLTDQDTEGVVGDYVTLMTVHAAKGLEFKHIFIVGMEENLFPSMMNATEQGLE
EERRLFYVAITRAKESCHISFAAERSRNGRTERSRPSRFLQELDDAYVERRVPQEMLGGH
SQGDELPIHFSRSDAFERLPQPEPIRRRLVRVGSSPVHEERMVHQQIGDLCVGDTVAHAR
FGIGIIESLEGEGDNAKAEVSFQQVGRKRLLLRFAKLSKVEKDSI
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattatctctcatcattgaacgacagccaaaaggctgccgttctttataat
gacgggcctgccttggtgatagccggggcaggctccggcaaaacacgggtactcgtttat
aaattgctgcacctgattcactccggctacgatcccgcaaggctgatggcactgaccttt
acgaacaaggctgccaaagagatgaaagaacgtgtggcaagcgagatcggacctgctgct
tacaggatacagatgggtacattccattccgttttctctcgtatacttagagagaatgcg
acacacctcggatatactcgcgacttcagcatatacgatacgaacgataccaagagcttg
ctgcgtcatgtgatgaagcgcatgaatatcgatgataaggtatatcgcctcaacgctgta
caacatcgtatatcgatggctaagaatcagctgatctctcccgaatcgtatgctgccaat
aaggatctctcccgatatgatatagactgtcgaatgcctcggatggcagagatttattct
ctctataccattctgtgcaagcagaataatgccatggatttcgatgatctgcttttcaaa
atcaatgtcctttttcgtgattttccggatgtcttgcagacctaccgtgaccgcatcgat
tatttattgatcgacgaatatcaggataccaactttgcacagtatttgattgccaggcag
ttgatgggggagaaaggcaaggtattcgtcgtgggggatgatgctcagagtatatacagt
ttccgtggagccaaagtggaaaacattctgggcttttcaaagtcgttccccgggagcaaa
cttttcaaacttgaggagaactatcggagtacacagagcatcgtcaatgctgccaatagc
ttgattgctcacaatgaggggcgaatccccaagcaagttttttcgaacaaacaagtaggt
gagcgtattcgcctgacgggttgtctgtcggggtatttggaggcttatacggtagcggat
tcgatcgtcgagcgacgcatgcaagagcattgtccttattccgatttcgccattctgtac
cgcactaatgcgcagagccgagttttcgaggaagcacttcgcaaacacaatatccctttt
cgtatatacggtgggctttcgttctattcgcgaaaagagatcaaggacgtcctggcctat
tttcgtctaatcgtaaatcccaatgatgacgaagcactcaggcgtgtaatcaattatccc
aagcgaggaataggagataccactctgtctcgtcttaacgagatagccacggcttcttct
cgttcgttgtgggacgtactgtccgaatcgcagaagggtcttcccgatcttagtgctaca
gcccgacgccgtcttggtgagttcgtttccctcatccgtgaacttcaggagtccgaatac
gaatctttgtacgaacaagcagccgatgtggtcaaacggagcgggatctcggccgaaatt
ttttctgacaaaagtatcgagggaataagtcggcaggaaaacctcaaagaattgctcaac
ggcattgaggaatacggcacttcttacgccgaagaaaggggagagaaaccctccttggga
acgttcctaaacgaggttgtactcctgacggaccaagataccgagggagtggtcggagat
tatgtcaccctgatgacggtacatgctgcaaagggacttgagttcaagcatatttttatc
gttggtatggaagaaaatcttttcccttcgatgatgaatgctaccgaacagggtcttgag
gaagagcgtcgtctcttctatgtggctatcactcgtgccaaagaatcctgtcatatcagt
tttgctgcggaacgctcccgaaacggacgaacagagcgttcgcgtccgagccgcttctta
caagaacttgatgatgcatacgttgagcgacgtgtgccacaagaaatgttaggagggcac
agccaaggtgacgaacttcccatccatttttctcggagcgatgctttcgaaagattgcct
cagccggagccgattcgcagacggctggtacgcgtcggctcctctcctgttcatgaggag
cgaatggttcatcagcagataggagatttgtgcgtgggcgacacggtggcacatgcgcgc
ttcggaataggaatcatcgaatccctcgaaggagaaggcgataatgccaaggctgaggtt
tcgtttcagcaggtaggacgcaaacgtctgttacttcggtttgccaagctatccaaagtg
gaaaaagattcgatctga
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