KEGG   Porphyromonas gingivalis W83: PG_1258
Entry
PG_1258           CDS       T00145                                 
Symbol
hup-2
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
pgi  Porphyromonas gingivalis W83
Brite
KEGG Orthology (KO) [BR:pgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgi03032]
    PG_1258 (hup-2)
   03036 Chromosome and associated proteins [BR:pgi03036]
    PG_1258 (hup-2)
   03400 DNA repair and recombination proteins [BR:pgi03400]
    PG_1258 (hup-2)
DNA replication proteins [BR:pgi03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PG_1258 (hup-2)
Chromosome and associated proteins [BR:pgi03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PG_1258 (hup-2)
DNA repair and recombination proteins [BR:pgi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PG_1258 (hup-2)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-DNA_bdg FliG_N HU-CCDC81_bac_1
Other DBs
NCBI-ProteinID: AAQ66341
UniProt: Q7MV42
LinkDB
Position
complement(1334674..1334952)
AA seq 92 aa
MTKADVVNAIAKSTGIDKETTLKVVESFMDTIKDSLSEGDNVYLRGFGSFIVKERAEKTA
RNISKQTTIIIPKRNIPAFKPSKIFMSQMKQD
NT seq 279 nt   +upstreamnt  +downstreamnt
atgacgaaagctgacgtagtgaacgctattgcgaagtcgacagggattgataaagaaacg
accctgaaagtcgtagagtcgttcatggacactatcaaagactccctttcggaaggtgat
aatgtatatctccgcggatttggtagcttcattgtgaaggaaagagctgagaagacagca
cgtaatatttcgaagcagacgactatcatcatccccaaaaggaatattccggcgtttaag
ccttcgaaaatctttatgagtcagatgaaacaagactaa

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