Porphyromonas gingivalis W83: PG_1560
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Entry
PG_1560 CDS
T00145
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pgi
Porphyromonas gingivalis W83
Pathway
pgi00521
Streptomycin biosynthesis
pgi00523
Polyketide sugar unit biosynthesis
pgi00525
Acarbose and validamycin biosynthesis
pgi00541
Biosynthesis of various nucleotide sugars
pgi01100
Metabolic pathways
pgi01110
Biosynthesis of secondary metabolites
pgi01250
Biosynthesis of nucleotide sugars
Module
pgi_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pgi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PG_1560 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PG_1560 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PG_1560 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PG_1560 (rfbB)
00525 Acarbose and validamycin biosynthesis
PG_1560 (rfbB)
Enzymes [BR:
pgi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PG_1560 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
KR
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AAQ66594
UniProt:
Q7MUG3
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Position
complement(1639157..1640221)
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AA seq
354 aa
AA seq
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MNFRRHILITGGAGFIGSHVVRLMVNAYPDYEIINLDTLTYAGNLANLKDIESKPNYRFV
KADICNANTLKKVFAHYAIDGVIHLAAESHVDRSIKDPLAFARTNVMGTLTLLQTAKEAW
HGEYEGKRFYHISTDEVYGALAFDGTLFTEETKYDPHSPYSASKASSDHFVRAYHDTFGL
PTVISNCSNNYGPYQFPEKLIPLFINNIRHNKPLPVYGKGENVRDWLYVEDHARAIDLIF
HRGKNGDTYNIGGFNEWKNIDLIKVMIRVVDRLLGREEGSSEKLITYVADRAGHDLRYAI
DSTKLKNELGWEPSLQFEEGIEKTVRWYLHNQDWLDRVTSGDYLRYYDEMYSER
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacttccgacgtcatattctcatcaccggcggtgccggttttatcggatcgcatgtg
gtacgactcatggtcaatgcttatcctgattatgagatcatcaatctcgatacgctgaca
tatgccggcaatctggccaatctcaaggatatagagtccaagccgaactatcgtttcgta
aaggcggatatttgcaatgccaatacgctgaagaaagtctttgctcattatgccatcgac
ggagtcattcatctggcggccgaaagtcatgtggatcggtctataaaagatcctttagct
tttgcccgcaccaacgtaatggggacgctgacgctcctgcaaacggccaaagaggcttgg
catggggaatacgaaggcaagcgtttctaccacatatcgaccgatgaggtatatggagca
ttggctttcgacggtacgctgtttacggaagaaaccaaatacgacccacattctccctat
tcggccagcaaggcttccagcgaccattttgtccgggcttatcacgatactttcggtctg
ccgacagtgatctccaactgctcgaacaactatgggccctatcaattcccggagaaactc
attcctctcttcattaacaatatccggcacaataagcctctacccgtctatgggaaaggg
gagaacgtccgtgactggctctatgtcgaagaccatgctcgtgccatcgatctgatattc
catcggggcaagaatggcgatacctataatatcggtggctttaacgaatggaagaacatc
gatctcatcaaggtgatgatccgcgtggtggatcgtcttttgggcagagaggaaggctct
tcggagaagctgatcacctatgtggcagacagagccggacacgatctgcgctatgccatc
gactcgactaagctgaaaaacgaactgggctgggaaccctctctccaattcgaagaaggc
atcgagaaaaccgtccgctggtatcttcacaatcaagactggctggatcgggtgaccagc
ggcgactacctccgatactacgacgagatgtactccgaacgatag
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