Porphyromonas gingivalis W83: PG_2188
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Entry
PG_2188 CDS
T00145
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pgi
Porphyromonas gingivalis W83
Pathway
pgi00300
Lysine biosynthesis
pgi00470
D-Amino acid metabolism
pgi01100
Metabolic pathways
pgi01110
Biosynthesis of secondary metabolites
pgi01120
Microbial metabolism in diverse environments
pgi01230
Biosynthesis of amino acids
Module
pgi_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PG_2188 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PG_2188 (lysA)
Enzymes [BR:
pgi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PG_2188 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
FBPase_glpX
Motif
Other DBs
NCBI-ProteinID:
AAQ67135
UniProt:
Q7MT14
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All DBs
Position
complement(2294723..2295871)
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AA seq
382 aa
AA seq
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MKTPFYFYDLTLLERTLSALARSAGRHDVAIHYALKANNHPRILQTVAAAGFGADCVSGG
EIEAAIEAGFPASDIFFAGVGKSDEEILLSLEARIGAFVVESVPELLNIERLAGSKNDIA
PILLRLNPEVDAHTHSHITTGLAENKFGLLPEDALALMPHLLQSGSLVWRGLHFHIGSQI
RSAKVFEKLCEKTNRILASFRTAGYSPDIIDMGGGLGINYDEPEAEPIPDFATYIERYRR
MIETGEARLHIEPGRSVVAQCGSLITQVLYIKEGKAKKFAIVDAGMTDLVRPALYEAHHQ
IRLVQPGEWTMRATSPSAALTEKYDVVGPICESSDVFERELLMPELKRGDYLAIRSAGAY
GAVMASSYNMRPLPGSLFSDEQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacctttctatttttatgatctgacactcttggagaggacgctttccgcgctc
gcccggagtgcaggaaggcacgatgttgccattcactatgcgctcaaggcgaacaatcat
cctcgtattttgcagacggttgcagctgccggcttcggggcggactgtgtgagtggaggg
gagatcgaagcggctatcgaggcaggctttcccgcttccgatattttttttgccggagta
ggcaaaagcgatgaagagattttgctttctttagaggcgcggataggtgctttcgtagta
gagagtgtgcccgaattgctgaacatcgaacgattggccggatcgaagaacgacatcgct
ccgatattgcttcggctcaatcctgaggtcgatgcgcatacgcacagccatataacgaca
ggattggcagaaaacaaattcggtcttttgcccgaagatgcacttgcactgatgccccac
cttttacagtccggatcgctggtatggagaggattgcacttccatattggatcgcagata
cggtcagccaaggtttttgagaagctatgcgaaaagaccaatcgcatccttgcttctttc
cgtacggccggctattcccctgacattatagatatgggaggcgggcttggtatcaattat
gacgagccggaggccgaaccgatacctgattttgccacttatatcgagcggtatcgacgg
atgatagagaccggtgaggctcggctgcatatcgaacccgggcgttcggtggtggcacaa
tgcggcagtctgattactcaagtgctgtacatcaaagaaggaaaggcaaaaaagtttgcc
atagtggatgccggtatgaccgacctcgtccgtccggctttgtatgaggcgcatcaccaa
atccggttggtgcaacccggagaatggacgatgcgtgcgacttctccctcagcggctctg
acagagaaatacgatgttgtcggccctatctgcgaatccagcgatgtattcgagcgtgaa
ttgctcatgcccgaactcaaacgcggcgattatctggctattcgttcggccggagcatat
ggagccgtgatggcttcttcctataatatgcgtccgctaccgggaagtcttttctcagat
gagcaataa
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