Pteropus vampyrus (Indian flying fox): 120582294 Help Entry 120582294         CDS       T07511                                  Symbol SMARCC1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism pgig  Pteropus vampyrus (Indian flying fox) Pathway pgig03082   ATP-dependent chromatin remodeling pgig04714   Thermogenesis pgig05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:pgig00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     120582294 (SMARCC1)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     120582294 (SMARCC1)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     120582294 (SMARCC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pgig03021]     120582294 (SMARCC1)    03036 Chromosome and associated proteins [BR:pgig03036]     120582294 (SMARCC1) Transcription machinery [BR:pgig03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      120582294 (SMARCC1) Chromosome and associated proteins [BR:pgig03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     120582294 (SMARCC1)    PBAF complex     120582294 (SMARCC1)    GBAF(ncBAF) complex     120582294 (SMARCC1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 DUF919 BRCT_2 SpeFL Motif Other DBs NCBI-GeneID:  120582294 NCBI-ProteinID:  XP_039693551 LinkDB All DBs Position Unknown AA seq 1104 aa AA seqDB search MAAVAGGGGPGAAAGTAGAGGAATAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH ILGAAYKYRNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLIPDIDLKL ANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVIRKDKQMLVHWGFYPDSY DTWVHSNDVDAEVEDPPIPEKPWKVHAKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRI STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG KEDEDPGKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTFGLESSCIAGTGPDEPEKLEGTEEEK METDTDVQQPEKAENKGENEVDESDKAQDGDNEKTSEKEQDSEVSEDAKSEEKETEENKE LTDVCKERESDIGKRKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ QQHGQNPPQAHQHSGPGLAPLGAAGHPSMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPG SMMPGQPMPGRMIPTVAANIHPPGSGPAAPGMPPMPGNVLGPRVTLTAPNGMYPPPPQQP PPPPPPADGVPPPPAPGPPASAAP NT seq 3315 nt NT seq  +upstreamnt  +downstreamnt atggccgcggtagcgggcggcggcgggccgggggcggcggcgggcaccgcgggtgctgga ggtgcggcgacggccgcgggcctggccgtttatcggcggaaggacgggggcccggctagc aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc aagcattacaagaagtatgttcatgcagacgcccctaccaataaaacactggctgggctg gtggtgcagctcctccagtttcaggaagatgcctttgggaagcacgtcaccaacccggcc ttcaccaaactccctgcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac attcttggagctgcttacaagtatagaaatgaacagggctggcggaggtttgatctacag aatccatcccgaatggatcgtaatgttgagatgtttatgaacattgaaaaaacattggtg cagagcaactgcctgaccagacccaacatctacctcattccagacattgatctgaagttg gctaacaaattgaaagatatcatcaaacgacatcaggggacatttactgatgagaagtca aaagcttcccaccacatttatccatatccttcctcacaagaggatgaagagtggttgcga cctgtgataagaaaagacaagcagatgttagtgcattgggggttttacccagacagctat gatacttgggtccatagtaatgatgttgatgcggaagttgaagatccaccaattccagaa aagccatggaaggttcatgcaaaatggattttggacactgacattttcaatgaatggatg aatgaggaggattatgaggtggatgagaacaggaagcctgtgagttttcgtcagcgaatt tcaacaaaaaatgaagagccagtcagaagtccagagagaagagatagaaaagcatcagct aatgctcgaaagaggaaacattcgccttcccctccccctcccacacccacagagtcacgg aagaagagcgggaagaaaggccaggctagtctttatgggaagcgcagaagtcagaaagag gaagatgagcaagaagatcttaccaaggacatggaggacccaacacctgtacccaacata gaagaagtggtacttccaaaaaatgtaaatccaaagaaagatagtgaaaatacacctgtt aaaggaggaactgtagcagatctagatgagcaggatgaagagacagtcacaacaggagga aaggaagatgaggatcccggcaaaggtgatcagagtcggtccgttgaccctggtgaagat aatgtcacagagcaaaccaatcacattattattcctagctatgcgtcgtggtttgattat aactgtattcatgtgattgaacggcgtgctcttcctgagtttttcaatggaaagaataag tccaagactccagagatatacttggcatatcgaaattttatgattgacacatatcgccta aaccctcaagaatatttaaccagcactgcttgtcggaggaatttgactggagatgtgtgc gctgtgatgagggttcatgcctttttagagcaatgggggcttgttaattaccaagtggat ccagaaagtcgacccatggccatggggcctcctcctactcctcatttcaatgttttggct gataccccctctgggcttgtgcctctacatcttcgatcacctcaggtccctgctgctcag cagatgttaaattttcctgaaaagaacaaggaaaaaccaattgatttgcagaactttggt ctccgtactgacatttactccaagaaaaccttagcaaagagtaaaggtgctagcgctgga cgagaatggaccgaacaggagacgcttctgctgctggaggccctagagatgtacaaggat gattggaacaaagtgtcagaacacgttggaagtcgcactcaggatgaatgcatcctccac tttttgaggcttcccatcgaggacccataccttgagaattcagatgcttcccttgggccc ctggcctaccagcctgtcccctttagtcagtcaggaaacccagtcatgagcaccgttgcc tttttggcatctgtggtggaccctcgtgtggcatctgctgcggcaaaagcagctttggag gagttttctcgggtccgggaggaggtgccactggaattggttgaggctcacgtcaagaag gtgcaagaagcagctcgagcctctgggaaagtggaccccaccttcggcctggagagcagc tgcattgcaggcacggggcctgacgagccagaaaagcttgaaggaactgaagaggaaaaa atggaaacagatactgatgttcagcagcctgaaaaggcagaaaacaaaggggagaacgaa gtggatgaaagcgataaagcacaagatggagacaatgaaaaaactagcgagaaggagcag gatagtgaagttagtgaggacgccaaatcagaggaaaaggagaccgaagagaacaaggag ctcactgatgtttgtaaagaaagagagagcgatatcgggaagaggaaagtagaacatgaa atttctgaaggaaacgtggccacggctgctgcagctgccctggcctccgctgcgaccaaa gccaagcacctggctgccgtggaagagagaaagatcaagtctctggtagctctcctagtt gagacacagatgaagaaactggagatcaaacttcggcattttgaggagctggaaacgatc atggacagagaaaaagaggctttagaacagcagaggcagcagttgcttacggaacgccag aacttccacatggaacagctgaaatacgcggagttgcgagcccgccagcaaatggaacag cagcagcatgggcagaacccacctcaggcacaccagcactcaggacctgggctggcaccg ctgggagcagcagggcaccccagcatgatgccccatcagcagccccctccctaccctctg atgcaccaccagatgccgccgcctcaccccccacagccaggtcagataccaggcccaggt tccatgatgcctgggcagcccatgccaggccgaatgattcccaccgtggcagccaacatc cacccccctgggagtggccctgccgctcctggtatgcctccgatgccagggaacgtctta ggaccccgcgtaaccctcacggcacctaacggcatgtatccccctccaccgcagcagccg ccgccgccaccaccgcccgcagatggagtccctccacctcctgctccaggcccacctgcc tcggccgcaccctag

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