Pteropus vampyrus (Indian flying fox): 120582446
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Entry
120582446 CDS
T07511
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgig04121
]
120582446 (PDZRN3)
Enzymes [BR:
pgig01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120582446 (PDZRN3)
Ubiquitin system [BR:
pgig04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
120582446 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_3
zf-TRAF
zf-C3HC4_4
zf-RING_5
Prok-RING_4
TRAF3_RING
zf-RING_10
zf-RING_6
CEP104_ZnF
RING_XB3-XBAT31
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
120582446
NCBI-ProteinID:
XP_039693906
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQELPEHLERCDFAPARCRHAGCAQV
LLRRDVEAHMRDACEARPVGRCQEGCGLPLTSGEQRAGGHCCARALRAHNGALQARLAAL
RKALKKEALRAGKREQSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGD
KGEETRSLTLVLHRDSGSLGFNIVGGQPCADGPSGAGIFVSRVADGGPAARDGGLQVHDR
IVEVNGKDLSQATHDQAVDAFRTATEPIVVQVLRRAPRATAFSPVPGPQLADAATQTDIT
FEHIVALAKMAAPPTPGLGPCLLPEGHPSAHVYYDPGSYVGGGPQALDREELELEEVALC
RTSSQDKLGLTVCYRTDDEDDIGIFVSEIDPHGIAAKDGRIREGDRIIQINGLAVHNREQ
AVAALASKDKSFCLLIARPELQLDEAWMDDDRNDFLDDLHLDMLEEQHHQAMRVTASVLP
QKPQEEDGGTTDTATILSNQHEKDSGLGRTDDSTRNDESSEPENNGDEAPAADGGDLSAS
PEPPGSPGGLDAELRRLSRELRGVELEVLGVGRAPRPAAHAEAWMLPDSGFRNYNTSAEG
RRAALADITELPERSDRDSSSAYNSGESCRSTPLALETSPAGSLCRPAAGGAEAPAGASE
DGPAAEGAAESPVGAAGRQAHIPAHARRYRSYMQLVQQRSAVEFAPSQSSLAEPGAEWKV
KVRSDGSRYITKRPVRDRLLRERAIRLREERAGATTDDDAASELKLGRYWSREERKQQAL
RAKEQRRRRALLQSRPDAPPEPPGADERRGLSVLELSHKKMMKRRNRRILDNWMTVQELL
AHGSKAPDGSRVYSSFLSVTTV
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgccccgcgcgctgccgcggccgcctg
tcggccaaggagctcaaccacgtgctgccactcaagcggctcatcctcaagctggacatc
aagtgcgcgcacgcggcgcgcggctgcggccgggtggtcaagctgcaggagctgccggag
cacctcgagcgctgcgacttcgcgcccgcgcgctgccgccacgcggggtgcgcccaggtg
ctgctgcggcgcgacgtggaggcacacatgcgcgacgcgtgcgaggcgcggccggtgggc
cgctgccaggagggctgcgggctgcccctgacgagcggcgagcagcgcgcgggcggccac
tgctgcgcgcgggccctgcgggcacacaacggcgcgctgcaggcccggctggccgcgctg
cgcaaggcgctcaagaaggaggcgctgcgcgccggcaagcgcgagcagtcgctggtggcg
cagctggccgcggcgcagctggagctgcagatgaccgccctgcgctaccagaagaagttc
accgagtacagcgcgcgcctggactcgctcagccgctgcgtggccgcgccgcccggagac
aagggcgaagagaccagaagcctgaccctcgtcctgcaccgcgactccggctccctgggc
ttcaacatcgtgggcggccagccgtgtgcggacggaccgtccggcgcgggcatcttcgtg
tccagggtcgcggacggcgggccggcagccagggatgggggcctgcaggtgcacgaccgg
atcgtcgaggtcaacggcaaggacctgtcccaggccacccacgaccaggcggtggacgca
ttcaggacggccacagagcccattgtggtacaggtgctgcggagggccccacgggccacg
gcgttctcgcccgtgcccgggccacagctggcggacgcggccacgcagaccgacatcacc
ttcgagcacattgtggcactcgcgaagatggcagccccacccacgcctgggctggggccc
tgcctcctgccagaggggcacccctcggcacacgtgtactacgatcccggcagctacgtc
ggaggcggcccccaggccctggacagggaggagctggagctggaggaagtggctctgtgc
aggacgagcagccaggacaagctggggctcacggtgtgctaccgcacggacgacgaggac
gacattgggattttcgtgagcgagatcgacccgcacggcatcgcggccaaggacgggcgc
atccgggaaggagaccgcatcattcagatcaacgggctagcggtgcacaaccgagagcag
gccgtggctgccctcgccagcaaggacaagagcttctgcttgctgatcgcgcggcccgag
ctccagctggacgaggcctggatggacgacgacagaaacgactttctggacgacctgcac
ttggacatgctggaggagcagcaccaccaggccatgcgggtcacggccagcgtgctcccc
cagaagccgcaggaggaggacgggggcaccacagacaccgccaccatcctgtccaaccag
cacgagaaggacagcgggctgggccggaccgacgacagcactcgcaacgacgagagctct
gagcccgagaacaacggcgacgaggcgcccgcggcggacggcggcgacctgagcgccagc
cccgagcccccgggcagcccgggcggcctggacgccgagctgcggcggctgagccgggag
ctgcgcggcgtggagctggaggtgctgggcgtggggcgcgcgccgcggccggccgcgcac
gccgaggcctggatgctgccggacagcggcttccgcaactacaacacgagcgccgagggc
cgccgggccgcgctggccgacatcaccgagctgcccgagcgctcggaccgcgacagctcg
agcgcctacaacagcggggagagctgccgcagcacgccgctcgcgctggagacgtcgccc
gccggctccctgtgccggccggccgcgggcggcgccgaggcccccgcgggcgcgagcgag
gacgggccggcggccgagggcgccgcggagtccccggtgggcgcggccggccggcaggcg
cacatcccggcgcacgcgcggcgctaccgcagctacatgcagctggtgcagcagcgctcg
gccgtggagttcgcgcccagccagagcagcctggccgagccgggcgccgagtggaaggtc
aaggtgcgcagcgacggctcgcgctacatcaccaagcgcccggtgcgcgaccgcctgctg
cgggagcgcgcgatccgcctccgcgaggagcgcgcgggcgccaccacggacgacgacgcg
gccagcgagctgaagctcggccgctactggagccgcgaggagcgcaagcagcaggcgctg
cgcgccaaggagcagaggcgccggcgcgcgctgctgcagagccggcccgacgcgcccccc
gagccgcccggcgccgacgagcggcggggcctgagcgtcctggagctgagccacaagaag
atgatgaagcggaggaaccggcgcatcctggacaactggatgaccgtccaggagctgctg
gcacacggctccaaggcgcccgatgggtcccgcgtgtacagctccttcctgtcggtgaca
accgtgtga
DBGET
integrated database retrieval system
