Pteropus vampyrus (Indian flying fox): 120584535
Help
Entry
120584535 CDS
T07511
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03440
Homologous recombination
pgig03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120584535 (PALB2)
03460 Fanconi anemia pathway
120584535 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgig03400
]
120584535 (PALB2)
DNA repair and recombination proteins [BR:
pgig03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
120584535 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
120584535 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
120584535
NCBI-ProteinID:
XP_039696145
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MEEAPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKVKNSIQKTVQEQDCLVQ
QEDSAQLTHSEHKTEVSSCDTLRINTHLSGETADAEPESSVAGLGPVEGLQGQRRDDTQE
LPALRLHGSDGEKRQRKLLGRRRQQEGASVSQEGGSCFDSDSRVLSGKRLKEQEDAKRGD
PGTPETGIRSGLPRPASDVPDSRAPVTETSGGSVLTSPPAKPQGGVDAPVIGSHCSPAAP
LPWPAPAESGHTQCLQHQPSESASELTAHGLEDISPTSPVTIEAHYKKEAVSAGDPEINK
ASGASGRLPTSPNLEADDVRPVDELSYDTLLADNDQHLKEQNRTEKCPESSSNAPVGRTE
SLQEDEGLSRAESLGLEGISPVPTGNQTHSCTALEGLLFPAEYYVRITRRMSRCQRKGAL
EAVIQSHLGVRKKGFKNANKEAATNVNFSNRETNQREIRMSDPSPRRPSSRSPFQKLPSA
TEISSPAGPPKNDFFEKAVTQPSGRRRRGKRKSVCTPTLDHQGPLLHSSGTSGANRPKRD
VAVHEDQDEKAIVHGKEIRRQKADPLPSSDHAASASDGDDFSVPSPKDAVLRSKQLLSFL
KITDFQLPDEDFGPLKLEKLQRCSEGPIEPLRCRMAGRRQRRAGRCPAAEGLAPERIGLD
TGHCEEGPAALPGQAHPEVPGCTRQAQEGLSSSMVLLTPVSTITPGEDNRPAADACSPAF
PILGTTPAPGSQAHCVTVAADVAGNSCSTPPLSHSRATVSLAGDCRQCDTRTSPLKLESS
LHAPGRPSCDCASGPRATPPPIESLTFKDSQCSGHARPEPRRHSVQQPGIADIPACDSVV
LGDLQLVSRLKDPSAPCAVDVSALWWDVAGLKEPCIVTACEYAVSLWKPLDTWQWEKIYS
WHFTEVPVLQIVPVPDVCDLVCVALGNLEIQEIRALLCPSDGESGKQVLLSSGHIQAVLG
LTKRRLASSRGTLCDQQVEVMTFAEDGGSKEKRFLMPPEETIVTFVEVQGMQDALLSTTV
TNSIVIWNLKTGQLLKKMHIGDSYQASVCHKAYSEMGLLFVVLSHPCAKESEPSGSPVFQ
LIAINPKTTLNVGVMLYCLPRGQTGRFLEGDVRDSSAAAVLTSGTVAVWNLLLGHCAVLP
PVSGQSWSFVKWSGTHSHLLAGRKDGSIFVYLVS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggctcccggaaagcccctcagctgtgaggagaaggaaaagttgaaggaaaaa
ttagcattcttgaaaagggaatacagcaagacgttggcccgccttcagcgtgcccaaaga
gctgagaaggtcaagaattctattcagaaaactgtgcaagaacaagactgtttggtccag
caggaagactcagcacagctaacccactcagagcacaaaactgaagtatcttcgtgtgac
acgttacgcatcaacacccacctcagtggagaaactgcggacgctgagcctgagtcttct
gtcgctggactcggcccagtggaagggctccagggacagagacgagacgacacccaggaa
ctccccgccctcaggctccatggctctgacggtgagaaaaggcagaggaagctgctgggg
agaaggcggcagcaagagggagcatctgtttcacaagagggaggctcttgctttgactcc
gattcgcgtgtgctctctggaaaacgactaaaagagcaagaagacgccaagagaggggac
cccgggacccctgaaaccggaatcagaagtggccttccaaggcctgcgtctgatgttcca
gattctcgagcgccggttacagaaacgagcggagggagtgtgttaacgtccccacctgcc
aaaccgcagggcggcgtggatgcccccgtgataggaagtcactgctccccggcggctccg
cttccttggcccgccccagcagagagcggtcacactcagtgccttcaacatcagccttct
gaaagcgcctctgaacttactgctcacggtttagaagacattagccctacctcacctgta
accatagaggcacactacaaaaaagaggctgtctctgcaggtgacccagagataaataaa
gcttcgggtgcaagcggccggctgcctacaagccctaacttagaggcagatgatgtacgt
cctgtagatgaactctcttatgataccttactggcagataatgaccaacacctaaaagaa
cagaaccgcacagagaagtgtccagaatcctccagtaatgctcctgtcggcagaactgaa
agtcttcaggaagacgaaggtctcagtcgagctgagagtcttggcctagaaggaatctct
cctgttcctacaggaaaccaaacacattcttgcacagcactcgaaggccttcttttccca
gcagaatattacgttagaataacacgacgcatgtcaagatgccagaggaagggagccctg
gaggctgtcattcagagtcatttgggtgtcagaaagaaagggtttaaaaatgcaaataag
gaagctgctacaaacgtgaacttttccaatagagaaactaaccaaagggaaattaggatg
tctgatccatccccacgacggccaagttcaagaagtccttttcagaaacttccctcagca
actgagatcagctctcccgctgggccccctaaaaatgacttctttgagaaggcggttacc
cagccatctggtaggagacgcagaggaaaaaggaagtcagtctgcacccctacattagat
catcagggaccacttttgcactcttctgggacatcaggtgctaataggcccaagcgagat
gtcgctgtgcacgaagatcaggatgaaaaagcaattgtccatggaaaggaaattcgccgt
caaaaagcggacccccttccttccagcgatcatgctgcatcagcttcggatggtgacgat
ttcagtgttccgtctcctaaggatgcagtgttaaggtcgaagcagctgttgtctttcctg
aaaatcacagactttcagttacccgatgaggacttcggacctcttaagctcgaaaagctg
cagcgctgctcagaggggccgatcgagcctctgcgatgcaggatggccggaagacggcag
cgcagagcggggcggtgcccggcggcggaggggctggcccctgaacggatcggtctggac
acggggcactgcgaggagggcccggctgctctgccgggacaagcgcaccccgaagtccca
gggtgcacacgccaggctcaggagggcctgtcctcgtccatggtactgctcacgcccgtc
agtaccatcacgcccggtgaggacaacaggccggcggcagacgcgtgttcccccgccttc
cccatcttaggcactaccccagcccctggctcccaggcacactgtgtcacagtggcagcg
gacgtggctgggaactcctgctccacacccccgctttctcactcgagagccacagtcagc
ctcgctggtgactgtagacagtgtgacactcgcaccagcccactaaaattagagagcagc
ctgcacgcgccaggacggccttcctgtgactgtgcttctgggccccgagcaacaccgccg
cccattgagtcgctcactttcaaagacagtcagtgctccggacacgcgcgcccggaaccg
cggcggcattctgtccaacagcctggcatagcagacattcctgcctgtgacagcgtagtc
ctgggcgacctgcaactggtttcaaggttaaaggacccgtcagctccctgtgccgtggac
gtgagtgccctgtggtgggatgtggctggtctcaaggagccatgtatcgtaactgcttgt
gaatacgcagtttctctctggaaacctctggatacttggcagtgggaaaaaatctattcc
tggcatttcacagaggttccggtgttacagatcgttcccgtgcccgacgtttgcgacctc
gtgtgtgtggctttggggaatctggaaatccaagaaatcagggcgttactttgtccctcg
gatggtgaaagcggaaagcaggtgctcctgagctctgggcacatacaagccgtgctcggt
ttgaccaagaggaggctcgccagcagccgtgggacactctgcgatcagcaggtcgaagtc
atgacattcgcggaggacggaggaagcaaagaaaaacggtttttgatgccccccgaagag
actatagtaactttcgtcgaggttcaagggatgcaggacgccctgctcagcaccaccgta
acgaacagcattgtcatttggaatttaaaaacaggtcagctcctgaaaaagatgcacatt
ggcgattcctaccaagcttccgtctgtcacaaagcctattcggaaatggggctcctgttt
gtcgtcctgagtcatccctgtgccaaagagagtgagccatcggggagccctgtgtttcag
ctgattgcgattaaccctaagacgaccttgaatgtgggtgtgatgctctactgtcttcct
cgagggcagactggaaggttcctggaaggcgacgtgagggacagttctgcagcggcggtg
ttgacttctgggacggtcgccgtgtggaacttacttctgggtcattgcgctgttcttccg
cccgtctctggccagagctggtcttttgtaaaatggtcaggaacacattctcatttgctg
gctggacgaaaagatggaagcatatttgtgtatttggtaagttag
DBGET
integrated database retrieval system
