Pteropus vampyrus (Indian flying fox): 120585445
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Entry
120585445 CDS
T07511
Symbol
TRIM55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120585445 (TRIM55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgig04121
]
120585445 (TRIM55)
Ubiquitin system [BR:
pgig04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120585445 (TRIM55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
Cbl_N
Flagellin_C
Motif
Other DBs
NCBI-GeneID:
120585445
NCBI-ProteinID:
XP_039697684
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
YLPTRGGTTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKKSD
QPRCEEHEEEHINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAGLV
GSNDRVQGVISQLEDTCKTIEECCKKQKQELCEKFDYLYGILEERKNEMTQVITRTQGEK
LEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLQKISEASKAFQMEKI
EHGYENMNHFTVNLNREEKIIREIDFYREDAEEEEEEEEEGEEVEGEGEGEEGGGGGGEE
GVKVEEVEKVRTASLGEDESLEVALEPSQLASELQAAPATLPVSSPEPSPALPPAVDAPV
TQIGFENPPLQGQAAASGSGNGADSEPARHIFSFSWLNSLKE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcatctttgaattacaagtctttttccaaagagcagcagaccatggataacctg
gagaaacaactcatctgtcccatctgcttagagatgttcacgaagcccgtggtcattctc
ccgtgtcagcacaacctgtgtaggaaatgtgccagtgacattttccaggcctctaacccg
tacttgcccacgaggggaggcaccaccgtggcgtcagggggccgattccgctgcccttcc
tgtagacacgaagtggttttggatagacatgggatatacggacttcagaggaacctgctg
gtggaaaatatcattgacatctacaagcaagagtccaccagaccagaaaagaagtccgac
cagcccaggtgtgaggagcatgaagaggagcacatcaacatctactgtctgaactgcgag
gtgcccacctgctctctgtgcaaggtgttcggggcacacaaggactgccaggtggctccc
ctcactcatgtgttccagaggcagaagtctgagctcagtgatggcattgctggccttgtg
ggaagcaatgatcgagtgcagggagtgatcagccagctggaggacacttgtaaaactatc
gaggaatgctgcaaaaaacagaaacaggaactttgtgagaagtttgattacctgtatggc
atcctggaggagaggaagaatgagatgacccaagtcattacccgaacccaaggggagaaa
ctggaacatgtccgtgctctgatcaaaaagtattctgaccatttggagaacgtatcaaag
ttggtcgagtcaggaatccagttcatggatgagccagaaatggcagtgtttctgcagaac
gccaaaaccctgttacaaaaaatttctgaagcatcgaaggcatttcagatggagaaaata
gagcatggttatgagaacatgaaccacttcacagtcaacctcaatagagaagaaaaaata
atacgggaaattgatttttacagagaagatgcagaagaagaagaggaagaagaagaagaa
ggagaagaagtagaaggagagggagaaggagaagaaggaggaggaggaggaggagaagaa
ggagtgaaagtggaagaggtagaaaaagttcgaacggcgtcattaggagaagatgaaagt
ctggaggtagccttggaaccctctcagctggcctcggaactccaggctgccccagcaaca
cttccggtttcctctccagagccatctccagccctgccacctgctgtggatgccccagtg
acacagattggatttgagaaccctcccctccagggacaggctgcagcttcagggagtggg
aatggagctgattctgagccagctcgccacatcttctccttttcctggttgaactccctg
aaagaatga
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