Pteropus vampyrus (Indian flying fox): 120587498
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Entry
120587498 CDS
T07511
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120587498 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgig03041
]
120587498 (SF3B1)
03036 Chromosome and associated proteins [BR:
pgig03036
]
120587498 (SF3B1)
Spliceosome [BR:
pgig03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
120587498 (SF3B1)
Complex B
120587498 (SF3B1)
Complex C
U2 SnRNP specific factors
120587498 (SF3B1)
Chromosome and associated proteins [BR:
pgig03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
120587498 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
120587498
NCBI-ProteinID:
XP_039700263
UniProt:
A0A6P3QWP5
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattgccaagactcacgaagatattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatttatggtggaagtgatagcagatttgctggatatgtcacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttggtcagaag
aagccgggatatcatgcccctgtggcattgcttaatgatataccgcagtcaacagaacag
tatgatccatttgctgagcaccgacctccgaagattgcagaccgggaagatgaatacaaa
aagcacaggcggaccatgataatttccccagaacgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacagcat
ttgactaaagaagagagagaaattagacaacaactagcagaaaaagctaaagctggagaa
ctaaaagtcgtcaatggagcagcagcgtcccagcctccctcaaaacgaaaacggcgttgg
gatcaaacagccgatcaaactcctggtgccactcccaagaagctatcaagttgggatcag
gctgagacccctggacataccccttccttaagatgggatgagacaccaggtcgtgcaaag
ggaagtgagactcctggagcaaccccaggttccaaaatatgggatcctacacctagccac
acaccagcgggagctgctactcctggacggggtgatacaccgggccacgccacaccaggc
catggaggcgcaacttctagtgctcgtaaaaacagatgggatgagacccccaaaacagaa
agagatactcctgggcatggaagtggatgggctgagactcctcgaacagatcgaggtgga
gattcaattggtgaaacacctactcctggagccagtaaaagaaagtcacgttgggatgaa
acgccagctagtcagatgggtggaagcactcctgttctgacccctggaaaaacaccaatt
ggcacaccagctatgaacatggctacacctactccaggtcacataatgagcatgactcct
gaacagcttcaggcttggcgatgggagagagagattgatgagagaaatcgcccactttct
gatgaagaattagatgctatgtttccagaaggatataaggtacttcctcctccagctggc
tatgttcctattcgaactccagctcgaaagctgacagcaactccaacacctttgggtggt
atgactggtttccacatgcaaactgaagatagaactatgaaaagtgttaatgaccaacca
tctggaaatcttccatttttaaaacctgatgatattcagtactttgataaacttttggtt
gatgttgatgaatcaacacttagtccagaagagcaaaaagagagaaaaataatgaagttg
cttttaaaaattaagaatggaactcctccaatgagaaaggctgcattgcgtcagattact
gataaagctcgtgaatttggagctggtcctttgtttaatcagattcttcctctactaatg
tctccaacacttgaggatcaagagcgtcatttacttgtcaaagttattgacagaatatta
tacaaacttgatgacttagttcgaccatatgtgcacaagatccttgtagttattgaacca
ttgttgattgatgaagattactatgcaagagtggaaggccgagagattatttctaatttg
gcaaaggctgctggtctggctactatgatctctaccatgaggcctgatatagataacatg
gatgaatatgtccgtaacacaacagctagagcttttgctgttgtagcctctgccctgggc
attccttctttattgcccttcttaaaggctgtgtgcaaaagcaagaagtcctggcaagca
agacatactggtattaagattgtacagcagatagctattctcatgggctgtgccatcttg
ccacatctgagaagtttagttgaaatcattgaacatggtcttgtggatgagcagcagaaa
gttcggaccattagtgctttggccattgctgccttggctgaagcagcaactccttatggt
atcgaatcttttgattctgtattaaagcctctatggaagggtattcgccaacacagagga
aagggtttggctgccttcttaaaggctattgggtatcttattcctctcatggatgcagaa
tatgccaactactatactagagaagtgatgttaatccttattcgagaatttcagtctcct
gatgaagaaatgaagaaaattgtgctgaaggtagtaaagcagtgttgtggaacagatggt
gtagaagcaaactacattaaaacagagattcttcctcccttttttaaacacttctggcag
cacagaatggctttggatagaagaaattaccgccagttagttgacactactgtggagttg
gcaaacaaagtaggtgctgcagaaattatatccaggattgtggatgatctgaaagatgaa
gctgaacagtacagaaaaatggtgatggaaacaattgagaaaattatgggcaacttggga
gcagcagatatcgatcataaacttgaagaacagctgattgatggtattctttatgctttc
caagaacagactacagaggactcagtaatgttgaatgggtttggcaccgtggtcaatgct
cttggcaaacgagtcaaaccttacttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatcagctaaagttaggcaacaggcagctgacttgatctctcgaactgctgtt
gtcatgaagacttgtcaagaggaaaaattgatggggcacttgggtgttgttttatatgag
tatttgggtgaagagtaccctgaagtactgggcagcattcttggagcactgaaggccatt
gtaaatgtaataggtatgcataagatgactccaccaattaaagatctgctgcctagactc
acccctatcttaaagaacaggcatgaaaaagtacaagagaattgtatcgatcttgttgga
cgtattgctgacaggggagctgaatatgtatcagcaagggagtggatgaggatttgcttt
gagcttttggagctcttaaaagctcacaaaaaagctattcgtagagctacagtcaacaca
tttggttatattgcaaaggccattggtcctcatgatgtactggctacacttttaaacaac
ctcaaagttcaggaaaggcagaacagagtttgtactactgtagcaatagctattgttgcc
gaaacatgttcacccttcacagtactacctgccttaatgaatgaatacagagttcctgaa
ctgaatgttcaaaatggagtgttaaaatcactttccttcttgtttgaatatattggtgaa
atgggaaaggactacatttatgctgtaacaccattacttgaagatgctttaatggatagg
gaccttgtacacagacagacggctagtgcagtggtgcaacacatgtcacttggggtttat
ggatttggttgtgaagattcattgaatcacttgttgaactacgtatggcccaatgtgttt
gagacatctcctcatgtaattcaggcagttatgggagccctggagggcttgagagttgct
attggaccatgtagaatgttgcagtattgtttacagggtttgtttcacccagcccggaaa
gtcagagatgtgtattggaaaatttacaactccatctacattggttcacaggatgctctc
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttatgaactt
gactatatcttataa
DBGET
integrated database retrieval system
