Pteropus vampyrus (Indian flying fox): 120587615
Help
Entry
120587615 CDS
T07511
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120587615 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120587615 (BARD1)
04121 Ubiquitin system [BR:
pgig04121
]
120587615 (BARD1)
03036 Chromosome and associated proteins [BR:
pgig03036
]
120587615 (BARD1)
03400 DNA repair and recombination proteins [BR:
pgig03400
]
120587615 (BARD1)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120587615 (BARD1)
Ubiquitin system [BR:
pgig04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
120587615 (BARD1)
Chromosome and associated proteins [BR:
pgig03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120587615 (BARD1)
DNA repair and recombination proteins [BR:
pgig03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
120587615 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_3
Ank_5
BRCT_2
BRCT
zf-RING_5
ANK_LRRK2
Ank_KRIT1
RTT107_BRCT_5
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
120587615
NCBI-ProteinID:
XP_039700644
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MLGNRRPRVRSGNQPRPAPAMEPASGGAWAHSRAALDRLEKLLRCSRCANILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWLQDVKINRQLDSMIQLCSKLQNLLHENELSDLKE
DTSRKSSFNDAENKKNSIKMWFSPRSKKVRYVVSKISVQTQPQIVNEQNAQQASMYEYVS
TSPPVDVSARGKKASTRSGKKHKKKTLAQVNQEWNLEADKKDGELDSKEEFKEKLVSFCS
QPSVIASPQINGEIDLLASGSVADSECFGSVTEISLPLAEQIESPEIKSKNKVVTPEKNR
CENCLPSKKSVPLGRKGKRGLRRRLPNPSSKRCRSSIPSTSGHFVKQTVLSENTSLPGCS
LPPSSKVEVGGPLRRKTSDILDDSISPSPGIPPSTLNSPSYRRMMSSPSAVKLLPNSLMA
MKRNHRGETLLHIASIKGDVPSVEYLLQNGSDPNVKDHAGWTPLHEACSHGHLKVVELLL
QHKALVNTTGYQNDSPLHDAAKNGHMDIVKLLLSYGASRNAVNIFGLRPVDCTDSENMKS
LLLLPEKNESSSTSHCSVMHTGQRRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCTEFD
STVTHVIVPGDKVQSTLKCMLGILSGCWILKFEWVKACLQRKEYEQEEKYEIPEGPQRSR
LNREQLLPKLFDGCYFYFGGAFKHHPKDNLIKLVTAAGGQILSRKPKPDSDVTQTINTVA
YHAKPDSDQRFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVVSFELLPLDS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgctggggaaccgccggccgagggtccgctcggggaaccagccgcgacccgcgcccgcc
atggagccggcgagtggcggggcctgggcccacagccgcgccgcgcttgaccggctggag
aagctgctgcgctgctcgcgttgcgctaatattctgagggagcctgtgtgtttaggagga
tgtgagcacatcttctgtagtaactgtgtaagtgactgcattggaactggatgtccagtg
tgttatactccagcctggctacaagatgtgaaaataaatagacaattggacagcatgatc
cagctttgtagcaagcttcaaaatttgctacatgaaaatgagctttcagatttaaaagaa
gatacatctaggaaaagttcatttaatgatgcagaaaataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcagatatgttgtgagtaaaatttcagtgcaaacc
cagcctcaaattgtaaatgaacaaaatgctcagcaggcctcaatgtacgaatatgtttct
acaagtcctccagtagatgtctctgcgcgaggtaaaaaggcttccacgagatctgggaaa
aagcacaaaaagaaaactttagctcaagtcaaccaagaatggaatttagaggcagacaaa
aaagatggtgaacttgactccaaagaggaatttaaggaaaagctggtatctttctgtagc
cagccatctgttattgctagtcctcagataaatggtgaaatagacttgctagcaagtggt
tctgtagcagattctgaatgttttggaagcgtaactgaaatctctttaccattggctgag
caaatagagtctccagaaattaagagcaagaacaaagtagtgactcctgagaagaatcgc
tgtgaaaattgtcttccatctaagaaatccgtgcccttaggtcgtaaaggaaaacgtggg
cttcgcaggagactccccaatcccagttctaagagatgcagaagcagcattcccagcacc
agtggacattttgttaagcaaacagtgctatcggaaaacacatcattgcctggctgttct
ttgccaccttcaagcaaagttgaagttggtggcccattaaggaggaaaaccagtgatata
ttagatgactccattagcccttcaccaggtataccaccttctacactgaatagtccaagt
tacaggcgaatgatgtccagcccctcagctgtgaaactgttgcccaatagccttatggcc
atgaaaagaaatcatagaggagagaccttgctccatattgcttcaattaagggcgacgta
ccttctgttgaataccttttacaaaatggaagcgacccaaacgttaaagaccatgctgga
tggacaccattgcatgaggcctgcagtcatgggcacctgaaggtagtggaattgctgctc
cagcacaaggcattggtgaacaccactgggtatcagaacgactcaccactccacgatgca
gccaagaatgggcacatggatatagtcaagttgttactttcctatggagcctccaggaac
gctgttaacatatttggtctgcgacctgtggattgtacagacagtgaaaatatgaaatca
ctattgctgctaccagagaagaatgaatcatcatcaactagccattgctcagtaatgcac
actggtcagcgtagagatgggcctcttgtacttataggcagtgggctttcttcagaacaa
cagaaaatgctcagtgaacttgcagcaattctcaaggctaaaaaatgcactgagtttgac
agtacagtaactcatgtcattgttcctggtgataaagttcaaagtaccctgaaatgtatg
ctcgggattctcagtggatgctggatcctaaagtttgaatgggtgaaagcatgtctacaa
agaaaagaatatgaacaggaagaaaaatatgaaattcctgaaggaccacagagaagcaga
ctcaacagagaacagctgttgccaaagctgtttgatggatgctacttctattttggggga
gccttcaaacaccatccaaaggacaaccttattaagctcgtcaccgcagctgggggccag
atcctcagtagaaagcccaagccagacagtgacgtgactcaaaccattaatacagtcgcg
taccatgccaagccagattctgatcagcgcttctgtacacagtatatcatctatgaggac
ttgtctaatcatcgcccagagagggttcggcagggcaaagtctggatggctccttctagc
tggtttatagattgtgtggtgtcctttgagttgcttcctcttgacagctga
DBGET
integrated database retrieval system
