Pteropus vampyrus (Indian flying fox): 120590831
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Entry
120590831 CDS
T07511
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgig03041
]
120590831 (YTHDC2)
Enzymes [BR:
pgig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120590831 (YTHDC2)
Spliceosome [BR:
pgig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120590831 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
HA2_N
Ank_2
AAA_19
nSTAND3
Ank
AAA_22
ATPase
PhoH
AAA_7
AAA_16
UvrD-helicase
AAA_29
Ank_4
T2SSE
ABC_tran
SRP54
Sigma54_activat
AAA_23
Motif
Other DBs
NCBI-GeneID:
120590831
NCBI-ProteinID:
XP_039704409
LinkDB
All DBs
Position
Unknown
AA seq
1437 aa
AA seq
DB search
MSRPSSVSPRPPAPGGGGGGGGSGGGGGLAQCGPGGGGRAKGLKDIRIDEEVKIAVNIAL
ERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHA
MMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNG
IPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDD
CFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTN
GVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDV
NLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTE
WYSAQENTFKPESQRQRTVPNVTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACL
SDIWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGADV
HSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLK
AYHHSFDDEKVDLDLIMHLLYNICHNCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNT
HRYQVFMLHSNMQTSDQKKVLKNPPTGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKS
FDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPL
QELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLA
DLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGT
FSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRAR
GGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENVLLTGPKEKKVRFHPTSVLSQPQ
YKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNA
LQEPTSFRADGIPNDSSDSEMEDRTTANLAALKLDEWLSFKLEPEAASLLLQLRQKWHSL
FLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSW
RSNNSRKTSADTEFSDESTTAERVLMKSPSPALHPPQKYKDRGILHPKRSTDDRSDQSSV
KSTDSSSYPSPCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLEISQQKGIWSTT
PSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEW
IRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPLGEKTTTD
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccgagcagcgtctcccctcggccgccggctcctggaggaggcggcggcggt
ggtggcagcggcggcgggggcggcctcgctcagtgtggccctgggggcggcggccgggcc
aaggggctgaaggacattcgtatagacgaagaggtgaagatcgcagtcaatatcgctctg
gagcgcttccgatatggggaccagagagaaatggaatttccttcttctctgaccagtact
gaaagagcctttatccatcgattgagtcagtctcttggtttggtctctaaaagtaaagga
aagggagcaaatagatacctaactgtgaagaagaaagatggatcagaaacagctcatgca
atgatgacctgtaatttgactcataatacaaaacatgctgttaggagcctaattcaaaga
tttcctgtcaccaataaagagcgtactgaacttctgcctaaaacagaaagaggaaatgtg
tttgcagttgaagctgaaaaccgggaaatgagcaagacaagtgggcgactcaacaatggc
atacctcaaattccagtgaaaagaggagaatctgaatttgattctttcaggcagtctctg
ccagtgtttgagaaacaagaagaaattgttaaaataattaaggaaaataaagtagttttg
attgtaggagaaactgggtctggaaagactacgcagatcccacagtttcttttagatgat
tgttttaaaaatggtatcccctgccgtatattttgtactcagccaagacgattagcagct
attgctgtggctgaaagagttgctgcagagagaagagagaggattggtcaaacaattggg
tatcagatacgattagaaagcagagtttctccaaagacacttctgacattttgcacaaat
ggagtattgcttcgtacattgatggcaggagatagtacattgtcaactgtgacacatgta
attgtggatgaagtacatgaaagggatcgatttagtgattttctacttactaagttaaga
gatttgttgcaaaagcacccaactttgaaactaattctttctagtgcagccttggatgta
aatctgtttataagatattttggaagttgtccagtgatatatattcaaggaagaccattt
gaagtaaaagaaatgtttctggaagacattttaagaactactggatacacaaacaaagaa
atgttaaaatacaaaaaggaaaaacagcgagaagagaaacaacaaaccacacttacagaa
tggtattcagctcaagagaatactttcaaacctgaatctcagaggcagagaactgttcca
aatgtgactgaagagtatgatttattggatgatggtggtgatgccgtattcagtcagttg
acagaaaaagatgtgaattgccttgaaccatggttaataaaggaaatggatgcttgtctt
tctgacatatggctgcataaagatgttgatgcctttgctcaggtttttcaccttatttta
actgaaaatgtcagtgttgattacagacatagtgaaaccagtgcaacagctttgatggtt
gctgcaggacgaggtttttcaagtcaagtagagcagttaattagtatgggagccgatgtc
catagcaaagcatcaaatggctggatggctttagattgggctaaacactttgggcagact
gaaattgtagatcttctggaatcttacagtgcttcattggagtttggaaatctagatgaa
agttctctggttcaaacaaatggaagtgacctcagtgcagaagacagagaactcttgaaa
gcttatcatcatagtttcgatgatgaaaaagtagacttggatttgatcatgcatcttcta
tataatatctgtcataattgtgatgctggtgcaatattaattttcctacctggatatgat
gaaattgttggactgagagatcgcatcctatttgatgacaagcggtttgctgacaataca
catagatatcaagtctttatgcttcattcaaatatgcaaacatctgatcaaaagaaagta
ttaaaaaacccacctacaggtgttcgaaaaataatcctttctaccaatattgctgaaacc
agcatcacagtcaatgatgttgtctttgttattgattctggtaaggtgaaagagaaatcc
tttgatgcactgaattttgttacaatgttgaaaatggtttggatttccaaagctagtgcc
atacaacgaaaaggcagggcaggacgatgtagacctggaatttgtttccggctgttcagt
agactccgattccaaaatatgttggaatttcagactccagaacttttgagaatgccatta
caggaactttgtttacataccaagctgttagccccagttaattgtccaattgctgatttc
cttatgaaagctcctgaacctccaccagctctaattgtaagaaatgctgtacaaatgctc
aagacaatagatgcaatggatacatgggaagatctcactgaactgggatatcatttggct
gacttgccagtagaaccacatcttggtaaaatggtcctgtgtgctgttgttttaaagtgt
ctggaccccatccttacaattgcctgcacactagcctatcgagatccttttgtcctgcca
acccaggcctctcaaaaacgtgcagctatgctttgtagaaaacgtttcactgcaggaact
ttcagtgatcatatggcacttctcagagcatttcaggcatggcagaaagcacgaagtgat
gggtgggagcgagccttttgtgaaaagaattttctttcacaagctaccatggaaataatc
ataggcatgagaactcagttgcttggtcaacttagagcatcaggttttgttagagcacga
ggaggtggtgacattagagatgttaacacaaattccgagaactgggctgttgttaaagct
gcattggtggcaggcatgtatcctaatttagtccatgtggacagagagaatgtattgttg
acagggccaaaggagaaaaaagtacggtttcatcctacttcagttctcagtcagcctcaa
tataaaaagattcctccagccaatggtcaagctgcagcaattcaggcactgcccacagat
tggcttatttatgatgaaatgaccagagcccatcgaatagctaacattagatgttgttca
gcagttacacctgtaactgtattagtattctgtggaccagctaggttggcaagtaatgct
cttcaggaacctacatcttttcgagcggatggtattcctaatgacagcagcgatagtgaa
atggaagatagaactactgctaacttggcagctttgaaacttgatgagtggctcagtttc
aaactagagcctgaggcagccagtttattgctgcagctcagacagaagtggcacagctta
tttttacgccgaatgagagctccatctaaaccttggtctcaagttgatgaagctaccatt
agagcaattatagctgttttaagtactgaagaacagtcagcaggtttacaacaaccatct
gggattggccaaaggccaaggcctatgtcttcagaagaacttcctttggcatcatcttgg
aggtcaaataacagtagaaaaacgtcagcagatactgaattttctgatgagtctactact
gcagaaagagtgttgatgaaatctccatctccagcactacatccacctcagaagtacaaa
gatagaggaattttacatcccaaacgaagcactgatgaccgatcagatcaatcttctgtg
aaatctacagatagcagtagttacccaagtccgtgtgctagtccttctcctccgtcctca
ggaaagggttcaaaatctccttcaccaagaccaaacatgcctattcgatacttcataatg
aagagtagcaatttgagaaaccttgaaatttctcagcagaagggtatctggtctacaacc
cctagtaatgagcggaagctaaatcgagccttttgggaaagcagcatggtttacttggta
ttttctgttcaaggatctggacatttccagggattttctaggatgtcttctgagatagga
agggagaagagccaggactggggctcagctggactaggaggagtatttaaggtggagtgg
atacgaaaagaaagtcttccctttcagtttgcacaccatttactcaatccttggaatgat
aacaagaaagtccagataagcagagatgggcaggaactagaacctcaggttggggaacag
ttgctccagttatgggaacgccttccattgggagaaaaaaccacaactgattga
DBGET
integrated database retrieval system
