Pteropus vampyrus (Indian flying fox): 120591153
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Entry
120591153 CDS
T07511
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03030
DNA replication
pgig03410
Base excision repair
pgig03420
Nucleotide excision repair
pgig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120591153 (RFC1)
03410 Base excision repair
120591153 (RFC1)
03420 Nucleotide excision repair
120591153 (RFC1)
03430 Mismatch repair
120591153 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgig03032
]
120591153 (RFC1)
03400 DNA repair and recombination proteins [BR:
pgig03400
]
120591153 (RFC1)
DNA replication proteins [BR:
pgig03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120591153 (RFC1)
DNA repair and recombination proteins [BR:
pgig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120591153 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_14
BRCT_2
AAA_5
AAA_30
RuvB_N
Rad17
AAA_33
AAA_16
AAA_7
AAA_17
AAA_18
nSTAND3
RNA_helicase
AAA_19
NTPase_1
NPHP3_N
SKI
Motif
Other DBs
NCBI-GeneID:
120591153
NCBI-ProteinID:
XP_039704672
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MAAARRHQHRTGAHVALPASGWEAVRFLTSSPGAAASTSFYLEGEVVGANGSRAPVTDSH
PARPRLKTWVAMVSLRRRLCGSGAWRVCRLGVDGALLLIFHNASILGDRVGIFMPNWETL
QFFVFSKKDEKLMVATLLPCIFRIIKRNLCPIVNRNYCDKGCLHTKWLLTLKITLKDIRK
FFGVIPSEKKPASETVKKNEKTKSAEETFKAKKGIKEIKVNSSCKEDDSKQKQPNKKKRV
IYDSDSESEETVQVKNAQKEPEKLSLSPKPGKIIRTDPVTYISETDEEDDFVCKKAASKS
KENGGSTNSYLGATNMKKNEENIKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKKMVASK
RKEPSQNADDSRLNDEAIAKQLQLDEDAEIQKAYLSSIPNQLERQLHEDEEFARTLAMLD
EEPKNKKAQKDQEERETFSSVQANLHKTEKHKSPYKVKTEQFLDERKNYSPKKQTKHESS
KESQQHSKSSPYKIRKTSSPKASSKLTLLKKKGESSSKETEPMSSKRKENAIELKETKTP
KKTKSSPAKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVI
TGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDG
LLDLIRTMPGKKSKYEIAVEAEMNKGKSRLQRTPQKNEQGKRKISPTKKESESKRSRLTP
KRGSSLNSVKKETSVFRRGLDFKEQEAEDTVGNSWARNWADDSSENKVENLLWVDKYKPT
SLKTIIGQQGDQSCANKLLRWLQNWHKRPSEDKKHAKFGKFAGKDDGSSFKAALLSGPPG
VGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIRGFYSSGAAHSVSTK
HALIMDEVDGMAGTEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQR
PRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAK
ADSHRAKKDIKLGPFDVARKVFATGEETAHMSLVDKSDLFFHDYSIAPLFVQENYLHVKP
VAAGGDMKKHLMLLSRAADSICDGDLVDRQIRSRQNWSLLPTQAIYASVLPGELMRGYMT
QFPSFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTINMDYLSHIRDVLVQPLISQG
VEGVQDVVALMDAYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEIHLTP
YSLQAVKTSRHSTGPALDSEYNEELNEDDSQSDEKDQDTTETDAMIKKKTKSSKSSKSEK
DKESRKGKGKSSKK
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcccgccggcatcagcaccgcacgggtgcccacgtcgcacttcccgcctcg
ggctgggaagctgtgcgcttcttgacgtcatcaccaggcgccgctgcctccacctccttc
tacttggagggagaagttgttggcgcgaatggatcccgagccccggtaacggattcccac
cctgcccgcccgcgccttaagacttgggttgcgatggtgagtctcaggcggaggctctgc
ggctccggggcttggagagtttgcaggctgggtgtggacggggcactcctgcttattttt
cacaatgccagcattctgggagacagggtaggaatttttatgccaaattgggaaactttg
caattctttgtgttctcaaagaaggatgaaaaattgatggtagctaccttgttaccatgt
atcttcaggatcatcaagagaaatttatgtccaatagttaatcggaattattgcgacaaa
ggatgtttacacacaaagtggttgctcacattgaagataacactaaaggatattcggaaa
ttctttggggttatcccaagtgaaaagaaacctgcaagcgaaacagtaaagaagaatgag
aaaacaaagtctgctgaagaaactttcaaagcaaagaaaggaataaaggaaatcaaggta
aatagttcttgtaaagaagatgactctaaacagaagcaaccaaacaagaaaaagagggtc
atctatgattcagattcagaatcagaggagacagtgcaggtaaaaaatgcccaaaaggaa
ccagaaaaattgtcattgtctcctaaacctggtaaaattatacggacggatcctgttaca
tacatttcagaaacagatgaagaagatgacttcgtgtgtaagaaggcagcctctaaatca
aaagagaatggaggatccacaaatagttatcttggagcaacaaacatgaaaaagaatgaa
gaaaacattaagaccaagaataagcctctatcaccaataaagcttacccccacatcagtg
cttgattattttggaactggaagtgtccaacgatcagataagaagatggtggcaagcaaa
agaaaagagccttcacaaaatgcagatgattccaggttaaatgatgaagctatcgcaaag
caattgcaacttgatgaagatgcagagatacagaaggcttacctgtcatccattccaaac
cagctggagagacaattgcatgaagatgaagagtttgctagaacattagccatgttggat
gaagaacctaagaacaaaaaggctcaaaaggaccaagaagagagagaaacgttttcatct
gtccaagccaatttacataaaacagaaaaacataaatctccttataaagtgaaaacagaa
caatttctggatgaaaggaagaactacagtcctaagaaacaaactaaacatgaaagctca
aaagaatcccagcagcattccaagtcatcaccttacaaaataagaaaaacttcttctcct
aaagctagttccaagctgacgcttttgaaaaaaaaaggagagagttcttctaaagaaaca
gagcctatgtcctcgaaaagaaaagaaaatgccattgaattgaaagagacaaaaactcct
aagaagaccaaaagctctccagctaaaaaagagtctgtaagtcctgaagattctgaaaag
agacgcactaattatcaagcttatcgaagttacttaaatcgagaaggtcccaaagctctg
ggctccaaagaaattccaaagggagctgaaaattgcttggaaggccttatatttgtaatc
acaggagtgctggagtccattgaaagagatgaagccaagtctttaattgaacgttatgga
ggaaaagtaactggaaatgtcagcaagaaaacaaactaccttgtcatgggtcgtgatagc
ggacagtccaagagtgataaggcagcagctttggggacaaaaattattgatgaagatggc
ctattggatctgattcgaactatgccaggcaagaagtccaaatatgaaatagcagttgaa
gctgagatgaataaaggaaagtccagattgcaaagaacaccacaaaaaaatgaacaagga
aaaagaaaaattagtccaaccaagaaggagtcagaatccaaaaggagcagactgactccc
aaaaggggcagctctctaaattcagtaaaaaaggaaacaagtgtgtttcggagaggcctg
gacttcaaggagcaggaggctgaggacacagtcggtaacagctgggctaggaattgggct
gatgacagcagtgaaaacaaagtggaaaatttgctctgggttgataaatataagccaacc
tcactcaagaccataattggacagcaaggtgaccagagctgtgccaacaaacttctacgc
tggctccaaaactggcacaagagaccatctgaagataagaaacacgcaaagtttggtaaa
tttgccggcaaagatgatggctctagttttaaagcagcattgctctcaggccctccaggt
gttggcaaaacaaccacagcctctctggtctgtcaggaattgggatatagctacgtggaa
ctgaatgcaagtgatactcggagtaagaacagtttgaaggagattgttgctgagtcactt
aataataccagcatcagaggcttttattcaagtggagcagcccattcagtaagcacgaaa
cacgctctcatcatggatgaagtggatggcatggcgggcacggaagacaggggaggaatt
caggaattaattggcctgataaaacatacaaaaattcccattatttgtatgtgcaacgat
agaaatcatcccaagattcgctctttggttcattattgttttgaccttcgttttcaaaga
cctcgggttgaacagataaagggtgcgatgatgtctattgcatttaaagagggtttaaag
attcctcctccagctatgaatgaaataattttgggagccaatcaagatatcagacaggtt
ttacacaatctgagtatgtggtgtgcacgaagtaaggcgctaacctatgaccaggccaag
gctgattctcatagagccaaaaaggatatcaaactgggcccatttgatgtagcccggaaa
gtgtttgcaactggagaagagactgctcacatgtcacttgtggacaaatcagatctcttt
tttcatgattattcaatagcgcccctctttgtccaggagaactacttacatgtgaagcct
gtagctgcagggggtgacatgaaaaagcacttgatgcttttaagcagagcggcagatagc
atatgtgacggtgacctagtggaccgtcagatccggagtaggcaaaactggagtcttctg
ccgacacaggccatttatgccagtgttcttccaggagagttaatgaggggttacatgact
cagtttcccagcttcccgagctggttgggtaagcactcatctacaggcaaacacgatcgg
attgttcaggacctggcattgcatatgagtctcagaacttactccagcaaaaggactatc
aatatggattatctgtcacatataagggatgtacttgtacagcccttgatctcacaaggg
gttgaaggagtacaggatgttgttgctcttatggacgcatattatttgatgaaagaagac
tttgagaatatcatggaaattagcagctggggaggcaaacctagccccttctccaagctg
gatcccaaggtgaaagctgcctttacaagagcttacaataaggaaatccaccttactccg
tattcacttcaggcagtaaagacatcaagacacagcacaggcccagcactggattctgaa
tataacgaagagttaaatgaagatgactctcagtctgatgagaaagatcaagacactacg
gaaactgatgctatgatcaagaaaaagacaaaatcttcaaagtcttcaaaatcagagaaa
gataaggagtccagaaaaggaaaaggaaaaagttcaaagaaatga
DBGET
integrated database retrieval system
