Pteropus vampyrus (Indian flying fox): 120591665
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Entry
120591665 CDS
T07511
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgig04121
]
120591665 (TRIM56)
Enzymes [BR:
pgig01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120591665 (TRIM56)
Ubiquitin system [BR:
pgig04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120591665 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4_4
ANCHR-like_BBOX
RING_XB3-XBAT31
PML_CC
CTD
Motif
Other DBs
NCBI-GeneID:
120591665
NCBI-ProteinID:
XP_039705201
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MVSQGSSPSLLEALSSDFLACKICLEQLRVPKTLPCLHTYCQDCLAQLAEGGHLRCPECR
ENVPVPPAGVAAFKTNFFVNGLLDLVRARAGGDLRAGKPACALCPLMGGASAGGPATARC
LDCADDLCQACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVDKNLAELEAARMVEKEA
LARLREHAAKVGTQVEEAAEGVLRALLAQKKEVLGQLRAHVEAAEEAARDRLGELEGREQ
VARAAAAFARRVLSLGREAEILSLEGAIAQRLRQLQGCPWMPGLPPCLLPQLELHPGLLD
KNCHLLWLSFEKQQPQKDSEKDGAGNQGGEENLGQREDGAKTERQGGVQPQSRDGAQTPK
EDRAQLPQEDGAQTPKVERAQTPKEDRSQTPQEDGGVQTPRGGRSNKKRKFKGRLKSISR
EPSPAPGPNLEGSGLLPRPIFSCSFPTRMPGDKRSPRITGLCPFGPREILVADEQNRALK
RFSLNGDYKGAVPVPEGCSPCSVAALQGAVAFSAGARLYLISPDGEVQWRRALSLSQASH
AVAAMPSGDRVAVSVSGHVEVYNMEGSLATRFIPGGKASRGLRALVFLTTSPQGNFVGSD
WQQNSVVVCDGLGQVIGEYGGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVILDPKGSLL
GDFLTAYHGLEKPRVTTMVDGRYLVVSLSNGTIHIFRVRSPDS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcccagggatcctcaccctccctgctggaggccctgagcagcgacttcctggcc
tgcaaaatctgcctagagcagctgcgggtgcccaaaaccttgccctgcctgcacacctac
tgccaggactgcctggcccagctggctgagggcggccacctccgatgccccgagtgccga
gagaatgtgcccgtgccaccagcaggtgtggctgccttcaagaccaacttctttgtcaac
gggctcctggatttggtgagggcccgggcaggtggagacctgcgtgcggggaagcctgcc
tgtgcactgtgccctctgatggggggtgcgagtgccggggggccagccacagcccggtgc
ctggactgtgctgatgacttgtgtcaggcctgtgccgacgggcaccgctgcacccggcag
actcacacccatcgagtggtggacctggtgggctacagggcagggtggtatgacgaggag
gcccgggagcgccaggcggcccagtgtccccagcacccgggggaggccctgcgcttcctg
tgccagccctgctcccagctgctgtgccgtgagtgccgcctggacccccacctggaccac
ccctgcttgcctctggctgaagctgtacgtgcccggaggccaggccttgaagagctacta
gcaggcgtagataagaacctggctgagctagaggctgcccgaatggtggaaaaggaagcc
ttggcccggctgcgggagcatgcagccaaggtagggacgcaggtggaggaggccgctgag
ggagtcctccgggccctcctggcccagaagaaggaagtgctggggcagctccgggctcac
gtggaggctgccgaggaggctgctcgggataggctgggggaactagagggccgggagcaa
gtggccagggcagcggctgcctttgctcgtagggtgctcagcctgggtcgtgaggccgag
atactctcgctggagggggcgattgcccagagactccggcagctgcagggttgtccttgg
atgcctggactacccccttgtctgctgccccagctggagctccatcctgggctcctggac
aagaactgtcacctgctatggctctcctttgagaagcagcagccccagaaggacagtgag
aaagatggagctggaaaccagggaggtgaagaaaacctgggccagagggaggatggagcc
aaaacagagagacaaggtggagtccagccccagagtagggatggagcccagaccccgaag
gaggacagagcccagctaccccaggaagatggagcccagactccaaaggtggagagagcc
caaaccccaaaagaagacagatcccagactccccaagaagatggaggagtccagacccca
aggggaggcagatccaacaagaagaggaagttcaaaggcaggctcaagtcaatttcccgg
gagcccagcccagcacctgggccaaacctggagggctctggcctcctccccaggcccata
ttttcctgcagtttccccacgcggatgcctggagacaagcggtctccccggatcactggg
ctctgtccctttggcccccgggaaatcctggtagcagacgagcagaacagggctctgaag
cgtttctctctcaatggtgactacaagggagccgtgcctgtccccgagggctgctcccca
tgcagcgtggccgccctgcagggtgcagtggccttctcagctggcgctcggctctatctc
atcagccctgatggtgaggtgcagtggcgccgggctctgagcctctcccaagccagccac
gctgtggctgcaatgccaagtggtgaccgggtggctgtcagcgtgtcaggccacgtagag
gtgtacaatatggaaggcagcctggctacccggtttatccctgggggcaaggccagccgg
ggcctgcgagcactggtgtttctgaccactagcccccagggcaattttgtggggtcagat
tggcaacagaatagtgtggtggtctgtgatgggctgggtcaagtgattggagagtatggg
ggaccaggcctgcatggctgccagccaggctctgtatctgtggataagaagggctacatc
tttctgacccttcgagaggtcaacaaggtggtgatcctagacccaaaggggtcactgctt
ggagacttcctgacagcctatcatggcctggaaaagccccgggtgaccaccatggtagac
ggcaggtacctggttgtgtcactcagtaacgggaccatccacatctttcgggttcgctct
cccgacagttaa
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integrated database retrieval system
