KEGG   Pteropus vampyrus (Indian flying fox): 120593374
Entry
120593374         CDS       T07511                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
pgig  Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:pgig00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgig03400]
    120593374 (MDC1)
DNA repair and recombination proteins [BR:pgig03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    120593374 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 120593374
NCBI-ProteinID: XP_039707100
LinkDB
Position
Unknown
AA seq 1640 aa
MHQETMIMEDTQAISWEVEEEEETERPSESLGHSLEPLGRLHIFSSAHGPEKDFPLYLGK
NVVGRMPDCSVALPFPSISKQHAVIEILAWDKAPVLRDCGSLNGTQILRPPKVLIPGMSH
RLRDQELVLFADLPCQYHRLNVPLPFVSRGPLTVEETPRVQGRTQPQGLLLAEDSEEEVD
SLSERCVVKESRTTSSPVATVIPESDEEGPSLAPDGPGPPFAFNLDSDTDEEENQQPAAG
EASSAATRDATAETEQPKAVVTEIQLEKNQCSVKERNNDTKIKSDARNGVVPIGVILERS
QPAGEDSETDVDDESRPPGRPVDLHLERTQPSGFIDSDTDLEEEGVPATPAVDPMKKRQI
LHGVSTNSPGGLDLAHLQETLADSDTDVEKGEASLMVPLERSQVSMVIDSNTDDEEEVSA
ALTLACLKESRAAVWNRDTDVEEDRTQPVAILEQSQTSSGKDSDTDVEEEGFLVEKRESV
PKGHTDKAHSEKSQPPFGDSDIEVEKDKSSPGVHLERNQASATMGINTQVEEEVPPGPAI
TLQEKHQMPVVWTNRTNMEAEGGPAKLPVVHLEEAQPPGGDYETDAEEGVSSAALAVADE
RKSQLPAEREAECALAVLEQERALEAGAQGGSPVAQVEEDPLPVSQENLTDLVVDTGTPG
EPTQPQRKGAQPLTESGREPHMDKTKDSRDNNDDSEDLDLQATQCFVERENQNLEGALDE
PWEVLATQPFYPRESEASETQPIAAHLEAHGSCPSPSRAMRRDQHPESPVHAEPLESQGR
GMQTVERGMGIPRETAERVTPKRGPLGRETKKLPPEGKREDVMGEEELTRVFQDREQKQV
LARATQKQESDKMVKRTSIEKDPKSLKVENETSKELQEKKVVEQTLGREIFERKAEKLAP
ERESEPGELEVCIPKAILDRGAQKEEIERESQDQKGQASSSTPEPEVGAGNLQGLASALI
ASRSQSGGERGAPMSPKRQQRGHLNCKIPPAEEPSKGDPESLDAYLPPTVPEASSPLETP
LISQSQKHPAPHLLSPFPPSLEPPIAMTRQNGSQEALETPLSSELAPLHAEPKARLWGSS
RMTSPVSSLAVEPHLTSSIDHPVSPKPTSWATRIRTRRFSEMTPAPVVPTAPELQSSTSK
DQPVTPKPTSRVTRSRTRRSSVKTPAPVVPTGPEFQPSISTDQPITPKPTSRATRGRTRR
SSVKTHQLVESTALDLESLNPTDQPVTREAIAQGAQSRTLRSTTSSVLVSTKLEFQSPTD
QPISPELIPQGNYSGRPRATRKHGSLSVPIIHEPCSAPPEPNSRSSRNQRRGAVKAAESR
RTIPAPAFAQIPEAPTHAPQIQKAEEAGRYGFTPEPPPKASQNHKRPLGTADLPPLQKRL
QRGEVSQKTAFLKEKEDPAERPGKEEDVVITGPGKRKRDQTEEEPKGMPGRSLRRTKLNE
STAPKVLFTGVVDARGERAVLALGGSLASSVAEASHLVTDRIRRTVKFLCALGRGIPILS
LDWLHQSRKAGCFLPPDEYVVTDPEQEKNFGFSLRDALSRAQKRRLLEGYEIHVTPGVQP
PPLQMGEIISCCGGTVLSSMPRSYKPQRVVITCSQDFPRCSIPFRVGLPILSPEFLLTGV
LKQEAKPEAFVLSTLEMSST
NT seq 4923 nt   +upstreamnt  +downstreamnt
atgcatcaagagactatgatcatggaggacactcaggctattagttgggaggttgaagaa
gaggaggagacagagagacccagtgaatctttggggcatagcttggagcccctagggcga
ctacatatcttcagtagtgcccatggaccagaaaaagatttcccactctacctcggaaag
aatgtggtaggccgaatgcctgattgctctgtggctctgccctttccatccatctccaaa
caacatgcagtgattgaaatcttggcctgggacaaggcacctgtcctccgggattgtggg
agcctcaatggtactcaaatcctgaggcctcctaaggtcctgatccctggcatgagtcat
cgtctgagggaccaggagttggttctgtttgctgacttgccctgccagtaccatcgcctg
aatgtccccttgccctttgtctcccggggccctctaactgtagaggagacacccagggta
cagggaagaactcaaccacaggggctcctgttggctgaggactcagaagaggaagtagat
tctctttctgaaaggtgtgtagtgaaagaatcaaggaccacgtcctcccctgtggcaaca
gtaattccagagagtgatgaagaggggccttcccttgccccagatggcccggggccacct
tttgccttcaacttggatagtgacacagatgaggaagaaaatcagcaaccagcagcaggg
gaggcttcctcagctgccacaagagatgccactgcagagacagaacaaccgaaagctgtc
gtaactgaaatccagcttgaaaagaatcagtgttcagtgaaggagaggaacaatgacaca
aaaatcaagagcgatgcgaggaatggagtggttccaattggagtgattctggagaggagc
caacctgctggggaggacagtgaaacagatgtggatgatgagagcaggcctccaggaagg
ccagttgacctccatctggaaaggacccagccttctggcttcatagacagtgatactgac
ctggaagaagagggggttcctgcaaccccagctgtagatcctatgaagaagaggcaaatc
ctccatggagttagtacaaacagtcctgggggacttgacttggcgcatcttcaggagacc
ctggctgatagtgatacagatgtggagaagggtgaggcctcactgatggtccctctggag
agaagccaggtctctatggtgattgacagcaatacagatgacgaggaagaagtctcagca
gcactcactttggcatgtctgaaagagagccgagctgctgtgtggaacagagataccgat
gtggaagaggacaggacacaacctgtggccattctggagcaaagccaaacttcctctggg
aaagacagcgacacagatgtggaggaggagggattcctagtggaaaagagagaatctgtc
cccaagggtcacacagacaaagcacattcagaaaagagccaacctccttttggtgacagt
gatatagaggtggagaaagataagagctcacctggagtccacctggagagaaaccaagcc
tctgccacaatgggcatcaacacacaagtggaagaggaagtcccaccagggccagctatt
acacttcaggagaagcatcagatgcctgtggtatggacaaatcgaacaaatatggaagca
gaagggggcccagcaaagttgcctgtggtacatctagaggaagcccaacctccaggtggg
gactatgaaacagatgctgaggagggtgtatcctcagcagctttagcagtggcagatgaa
agaaaaagccagcttccagctgaaagggaagcagaatgtgctttagctgttcttgagcag
gagagagctcttgaggcgggggctcagggtgggtcacctgtagcacaagtggaggaggac
cctctccctgtctcacaagagaacctaacagatttggtagtagacacaggtactccaggg
gagcccacccagccacagagaaagggagcccagcctctcacagaaagtggaagagaacca
catatggacaagaccaaagactctagagacaacaatgatgattctgaagatctggaccta
caagctacccagtgttttgtggagagagagaatcagaacctggaaggtgccctggatgag
ccatgggaggtcttggctacacagcccttctatccaagagagtctgaggcctctgaaacc
cagcccattgctgcccaccttgaggcccatggatcttgcccttctccatctagagcaatg
cgacgagaccaacatccagaaagcccagttcatgcagaaccattggagagtcaaggcaga
gggatgcaaactgtggagagaggcatgggtataccaagagaaacagcagagagggtgacc
cccaagagggggccattggggcgggaaaccaagaaactgccaccagaaggaaagagagaa
gatgtgatgggagaggaagaattaaccagagtgtttcaggacagagaacaaaagcaagtg
ttagctagagccactcagaaacaagaatctgataaaatggtgaaacgtacaagtatagaa
aaggatccgaagagtttaaaggtagaaaatgagacatccaaggaactacaagagaaaaag
gtagtagagcagactcttggaagagagatatttgagagaaaagcggagaaactagcacca
gagagagagagtgagccaggtgagttagaggtctgcatacccaaagcgatactggacaga
ggcgcacagaaagaggagatagaaagagagagccaggaccagaaaggacaggcctccagt
tcgacaccagaacctgaagtaggagcagggaaccttcagggactagcttcagccctgata
gcttccaggagccagtcaggtggagaaaggggagccccaatgagcccgaagaggcagcag
agaggtcacttgaattgcaagataccacctgctgaggagccttctaagggtgatccagaa
tccttagatgcttatctgcctccgacagtacctgaagcttcatccccactcgaaaccccc
cttatctctcagagccaaaaacatcctgcacctcatctcctttctccctttccaccctct
ttagagcctcccattgctatgaccaggcaaaatgggagtcaggaagctctagagactccc
ttgtcctcagagctggcccctcttcatgcagaacccaaagccaggctctgggggtcctcc
aggatgacatctccagtttcttctctagctgtggagccccaccttacctcctccatagac
catcccgtcagccctaagcccacatcttgggccactcgaatcaggacacgtaggttctct
gaaatgactcctgcaccagttgtccctacggcccctgagcttcaatcttccacctccaaa
gaccagcctgtaacccccaaacccacatctcgggttactcggagcagaacacgtaggtct
tctgtcaagactcctgcaccagttgtccccacaggccctgagttccagccttccatctcc
acagaccagcccatcacccccaagcccacatctcgggccactcggggcaggacacgtagg
tcctctgtcaagacccaccaactagttgagtccacagcccttgaccttgaatctctcaac
cccactgaccagcctgtcacccgcgaagccatagctcagggtgctcagagcaggacacta
aggtctacaacaagttctgtgctggtttctaccaaacttgaattccagtctcccacagac
cagcctatttcccctgaactcattcctcaaggcaattacagcgggaggccaagggccact
aggaagcatgggtccctttcagttcccataattcatgaaccttgctctgcaccccctgaa
cctaactcccggtcctcaaggaaccaaaggcgaggagcagtgaaagcagctgagtcccgt
aggaccattcctgcgcctgcctttgcccagattcctgaggcacccactcatgctcctcag
atccaaaaggcagaggaagcaggtagatacgggttcaccccagagcccccgcctaaggcc
tctcaaaaccacaagaggcctttaggtactgcggatttacccccacttcaaaaacggctc
caaagaggggaagtctcccagaagacagcattcctcaaggaaaaggaagaccctgcagag
aggccagggaaggaagaggatgtagtgattacaggaccaggaaaaagaaagagagaccag
accgaggaggagcccaagggaatgccaggccgcagcctccgacggaccaaacttaacgag
tccacagcccccaaagtgctcttcacaggagtggtggatgcccggggagagcgggcagtg
ctggccctggggggaagtctggccagctcagtggcagaggcatcccacctggtgactgat
cgaatccgcaggactgtcaagtttctgtgtgccctggggcggggcatccctatcctttcc
ctggactggctgcaccagtcccgcaaggctggttgcttcttgcccccggatgaatatgtg
gtgactgatcctgagcaggagaagaactttggcttcagccttcgagatgccctgagccgg
gcccagaagcgaaggctgctggagggctatgagattcatgtgacccctggagtccagcca
cctccacttcagatgggagaaatcatcagctgctgtggaggcactgtcctatccagcatg
ccccggtcctataagcctcagagagttgtgatcacatgctcccaggactttcctcgatgc
tccattccatttcgggttggcctgcccatcctttcacctgagttcctgctaacaggagtg
ctgaaacaggaagccaagccagaggcctttgttctctccactttggaaatgtcatccacc
taa

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