Pteropus vampyrus (Indian flying fox): 120593922
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Entry
120593922 CDS
T07511
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120593922 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120593922 (EDC4)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120593922 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
120593922 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_Prp19
WD40_CDC20-Fz
DUF445
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
120593922
NCBI-ProteinID:
XP_039707843
LinkDB
All DBs
Position
Unknown
AA seq
1436 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPTGGPSSESQRPSNAYNGDLNGLLVPDPLCSGDGTS
ANKPGLRAMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLTFAHLNSSQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHSTWPVDVSQIKQGFIVVKGHSTYL
SEGALSPDGTVLATASHDGFIKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPDVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGAGELLGARNVCLHVGSAVTQRARGLVVHTDLADGTHGAGAMESAAGVLIKLF
CVHTKALQDVQIRFQPQLNPDVVAPLPTHTAHEDFAFPTAFGDSQPELSSGGLGSAAHGS
QPDLRRIVELPAPADFLSLSTETKPKLMTPDAFMTSSTSLQQISASPSNSSGGSSSGSSS
SSSSSSLTAVSAMSSTSAVDPSLSRPPEELTLSPKLQLDGSLTMSSSSSLQASPRSLLPG
LLPGPADKLTPKGPGQVPTAASGLSLELQEVEPLGLPQASPSRTRSPDVISSASTALSQD
IPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLSPRPRPELGPQLSLDGGPGDGDRH
STPSLLEAALTQEATASDSQVWPTAPDITRETCSSLAESPRNGLQEKHKSLAFHRPPYHL
LQQHDSQDASAEQSDHDDEVASIASAAAGFGTKVSTPRLPAKDWKTKGSPRASPKLKRKG
KKDDGDSTAGSRLMEHQVTEPPEDWPAIIWQQQRELAELRHSQKELLQRLCTQLEGLQST
VTGHVERALESRHEQEQRRLERALAEGQQRGGQLQEQLTQQLSQALSSAVAGRLERSIRD
EIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEGNMKENISKLLKSKNLTDAIARAAADT
LQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQEYLQQLESHMKSRKAREQE
AREPVLAQLRSLVSTLQGATEQMAATVSNSVRAEVQHQLHVAVGSLQESILAQVQRIVKG
EVSVALKEQQASVTSSIMQAMRSAAGTPVPAAHLDCQAQQAHILQLLQQGHLNQAFQQAL
TAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLSFIQQLASDLGTRTDLKLSYLEEAVM
HLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPYNSLGKAARRLSLMLHGLVTPTLP
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctacgggacatcctc
aagctggaccggcccacggggggccccagttcagagagccaacggccatctaacgcctac
aatggggacctcaatggactcctggtcccagaccccctctgctcaggtgatggtacttca
gcaaacaagcctggtctccgggccatgccacctattaacctgcaggagaagcaggtcatc
tgcctttcaggagatgacagctctacctgcattgggattttggccaaggaggtggagatt
gtggccagcagtgactctagcatctcgagcaaggcacgagggagcaacaaggtgaaaatc
cagcctgttgccaagtatgactgggagcagaaatactactatggcaacctgattgctgtg
tccaactccttcttggcctatgccattcgggctgccaacaatggctcagcgatggtgcgg
gtgatcagcgtcagcacttcggaacggaccttactcaagggcttcacaggcagtgtggct
gacctgacctttgcacacctcaactcttcacagctggcctgcctggatgaggcaggcaac
ctgtttgtgtggcgcttggctctggttaatggcaaaattcaagaagagattttggttcat
atccggcagccagagggtacaccactgaaccactttcgtagaatcatctggtgccccttc
atccctgaggagagtgaggattgctgtgaggagggcagcccaacggtggccctgttgcat
gaagaccgggctgaggtgtgggacctagacatgctccgctccaaccacagcacctggcct
gtggatgtcagccaaatcaagcagggcttcattgtggtgaaaggccacagcacatacctg
agtgaaggggccctctcacctgatgggactgtcctggccaccgcaagccatgatggcttc
atcaaattctggcagatctacattgaggggcaggatgaaccaaggtgtctgcacgagtgg
aagcctcatgatgggcggcccctttcctgcctcctattctgtgacaaccacaagaaacag
gatcctgatgtccctttctggaggttcctcattactggcgctgaccagaatcgggagctg
aagatgtggtgcacagtgtcctggacctgcctgcagactattcgcttctccccagatatc
ttcagctcagtgagtgttccccctagcctcaaagtttgcctggacctctcagcagaatac
ctgattctcagtgatgtgcaacggaaggtcctctacgtgatggagctgctgcagaaccag
gaggagggccgtgcctgcttcagctccatctctgagttcctgcttacccaccctgtcctg
agctttggtatccaggtcgtgagtcgctgccggctgcggcacactgaggtgctgcctgcc
gaggaagagaacgacagcctaggggctggtgagctgctcggggccagaaatgtatgttta
catgtagggagcgctgtgacacagagggctaggggcttagttgtccacactgaccttgca
gatgggacccacggagctggtgccatggagtctgcagctggtgtgctcatcaagctcttc
tgtgtgcatactaaggctttgcaagatgtgcagatccgctttcagccacagctcaaccct
gatgtggtggccccgctccctacccacactgcccatgaggactttgcttttcctacagca
tttggagattctcagcctgaactgagctccggggggctgggatcagctgctcatggctcc
cagcctgacctccgacgcattgtggagctgcctgcacctgctgacttccttagtctgagc
actgagaccaagcccaagctgatgacacctgatgctttcatgacatctagcacctccctg
cagcagatctctgcatcccctagtaatagcagcggcggcagcagcagtggtagcagcagc
agcagcagcagctcctctcttacagctgtgtctgccatgagcagtacctcggctgtggat
ccctccttgtccaggccccctgaggagctgaccttgagccccaagctgcagctggatggc
agtctgacaatgagcagcagtagcagcctgcaggcaagcccacgcagcctcctgcccggc
ctgttaccaggtccagctgacaaactgactcccaaagggcctgggcaggtgcctactgct
gcctctggactatccctggagctgcaggaagtggagcccctggggctaccccaggcttcc
cctagccgtactcgctcccctgatgttatttcctcagcttccactgccctgtcccaggat
atccctgagatcgcgtctgaggccctgtcccgtggctttggctcctctgctcctgagggc
cttgaaccggacagtatggcctcagctgcttcggcactacacttgctgtccccacggcca
cggcccgagcttgggccccagcttagcctggatggaggccctggggatggggatcggcat
agtaccccttccctcctggaggcagccttgacccaagaggctacagcctctgacagtcag
gtctggccaacagcaccagacattactcgggagacctgcagcagcctggcagaaagccct
aggaatggccttcaggaaaagcacaagagcttggccttccaccgaccaccttatcatctg
ctgcagcaacatgacagccaggatgccagtgctgaacaaagtgaccatgatgatgaggtg
gccagcattgcctctgctgcagcgggctttggcaccaaagtttccactccacggcttcct
gccaaggactggaagaccaagggatctcctcgggcctcacctaagctcaagaggaagggc
aaaaaggatgatggggattcgactgcgggatcccggctcatggagcaccaggtgacagag
ccccctgaggattggcctgcaataatttggcaacagcagagagagctggcagagctgcgg
cacagccaaaaagagctactgcagcgtctgtgcacccagctcgaaggcctgcagagtacc
gtcacaggccatgtagaacgtgccctcgagtcccggcatgaacaggagcagcggcggttg
gagcgggcactggcagaggggcagcagcggggtgggcagctacaagagcagctgacacaa
cagctgtcacaggcactgtcttcagctgtggctgggaggctggaacgcagcatacgggac
gagatcaagaagacagtgcctccatgtgtctctaggagtctggaacccgtggcaggccaa
ctgagcaactcagtggccaccaaactcacagctgtggagggtaacatgaaagagaatatc
tccaagctgctgaagtccaagaacttaacagacgctattgcccgagcagctgcagacacg
ttacaagggccaatgcaggctgcctaccgtgaagccttccagagtgtggtgctgcctgcc
ttcgagaagagctgccaggccatgttccagcagatcaatgatagcttccgactgggcaca
caggaatacttgcagcagctagagagccacatgaagagccggaaggcacgagaacaggag
gcgcgggagcctgtgttggcccagctgcggagcctggtcagcacactgcagggtgccact
gagcagatggcagccactgtgtctaacagtgttcgggctgaggtgcagcaccagctgcat
gtggctgtgggcagcctgcaggagtcaattttagcacaggtacagcgcattgttaagggt
gaggtgagtgtggcactcaaggagcagcaggcctccgtcacctctagcatcatgcaagcc
atgcgctcagctgcaggcacacctgtcccagctgcccacctcgactgccaggcccagcaa
gcccatatcctgcagctgctgcagcagggccacctcaatcaggccttccagcaggccctc
acggctgctgacctgaacctggtgctgtatgtgtgtgaaactgtggacccaggccaggtt
tttgggcagccaccctgcccactctcccagcccgtgctcctttccttcatccagcagctg
gcctctgaccttggcactcgaactgacctcaagctcagctacctggaagaggctgtgatg
cacctggaccacagtgaccccatcactcgggaccacatgggctccgtcatggcccaggtg
cgccagaagttattccagttcctgcaggctgagccatacaactcacttggcaaagcggcc
cggcgtcttagcctcatgttgcatggccttgtgacccccaccctcccttag
DBGET
integrated database retrieval system
