Pteropus vampyrus (Indian flying fox): 120594389
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Entry
120594389 CDS
T07511
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120594389 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgig03021
]
120594389 (POLR1A)
Enzymes [BR:
pgig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120594389 (POLR1A)
Transcription machinery [BR:
pgig03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120594389 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
120594389
NCBI-ProteinID:
XP_039708286
LinkDB
All DBs
Position
Unknown
AA seq
1721 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
REVCSTCVQDFSNCAGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERILNRFLEENSDPTAFEIQEELERYTTKIVQNNLLGSQGAH
VKNVCESKSNLITYFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHKKAGQKDT
EPLGIEEAQMGKRGYLTPTSARDHLSALWKNEGFFLNFLFSGLEDVGMESSFSPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPCEVAAPAK
DEEKDSSVAMDRSFLSMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQT
LEKKDGLFRKHMMGKRVDYAARSVICPDLYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDLTQREAVAKQLLTPATGTPKPQGTKIVCR
HVKNGDILLLNRQPTLHKPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEASVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTTRGCFFNREQYMQLVYRG
LTDKVGRVKFFPPAIRKPFPLWTGKQVVSTLLINIIPEEHIPLNLSGKAKISGKAWVKES
PRPVPGFNPNSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGQTSGKVLTC
LARLFTAYLQLYRGFTLGMEDILVTPKADGKRHRIIGESAHCGPRAVRAALNLPETASCD
EVQGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWQNKHS
NTLLRKGAFLSYSQKVREAVKALNLQDANQHGRSPGTYQMLRMWGELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKMDDYSCEWASQAEKSYEKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVLNTKKALKRVKSLKRQLTRVCLGEVLQKIDVQETFCMGEKQNKSRMYQLRFH
FLPHAYYQQEKCLKPKDILHFMETRFFKILMESIRKKNSKASAFRSVNTRRATQRDLDNA
GESERNQGEQEGDEEEEGHIVDAEAEEGDADASDIKRKEKQEEEVDYESEEEGEKEGEEN
DDEEDVQEEGNVCGEGAHRAQEQDEEVGSSPEENSPPAPAPRQHRKPTCNPEPQGAEAVE
HRVQAVRESHPFIEDYQYDSEESLWCQVTVKLPLMKVNFDMSSLVVSLAHSTVIYATKGI
TRCLLNETTTNKNEKELILNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALR
VIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQ
FLKQATMMGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggcggcttcagggcatttccttcgggatgtat
tcggctgaggagctcaagaaattgagtgttaaatctattacgaaccctcggtacctggac
agcctggggaacccgtcggtgaacggcttgtatgatttagctctgggccctgcagattcc
agagaggtgtgctctacctgcgtgcaggacttcagcaactgcgctggccacctgggccat
attgagctccccctcacagtgtacaaccctctcctcttcgataagctctacctgttgctc
cggggctcctgtttaaactgccacatgctgacttgcccccgggctgtgattcacctccta
ctctgccagctgcgagttctggaagttggagcgcttcaagcagtatacgagctggagaga
attctgaacaggtttctggaagaaaactctgaccctactgcctttgaaattcaggaagag
ttagaacgatatacaaccaaaattgtacagaacaacctcctgggatcccagggtgcacat
gtgaaaaatgtctgtgagagcaagagcaatctcattacttacttctggaaggcacatatg
actgctaagcgatgtccccactgcaagactgggcggtcagttgtccgaaaggagcacaac
agcaaactgacaatcacgtatccagccatggtgcacaagaaggctggccagaaggacaca
gagcccctaggaattgaggaagctcagatgggaaaacgaggctacctaacacccaccagc
gcacgagaccatcttagtgccctctggaagaatgaaggattctttctgaatttccttttt
tcgggactggaagatgttggcatggagtccagtttcagccccagtatgttctttctggat
ttcttagtggtgcctccctcaagatatcgccctgtcaatcgcctgggggaccagatgttt
accaatggccagacggtgaacttgcaggctgtcatgaaggacatggttctgatccgaaag
cttctggctttgatggctcaagaacaggagctgccatgtgaggtggcagcacctgccaaa
gatgaggaaaaagactcttcagttgctatggaccgatcctttttgagtatgcttccaggc
cagtccctcacagacaaactatacaacatttggattcgccttcagagccacgtcaatatt
gtatttgatagcgagatggacaaattaatgatggaaaagtaccctggcattagacagacc
ttagagaagaaggacggcttgttccgaaagcacatgatggggaagcgagtagactatgca
gctcgctcggtcatctgcccagacctgtacatcaacaccaacgagattggaatccccatg
gtttttgccacaaagctgacctaccctcagccagttaccccctggaacgttcaggaactg
aggcaagcagtcatcaacggccccaatgtgcacccaggagcttccatggtcatcaacgag
gatggcagtcgcacagccttgagtgccgtggacctgacccagcgggaggccgtagccaaa
cagcttctgacaccagccacggggacgccaaagccccaggggacaaagattgtgtgccgg
catgtgaagaacggggacattctcctcctgaaccgacagcccaccctgcacaaaccctcc
atccaggcacatcacgcccgcatccttcccgaagagaaagtcctacggctccactatgcc
aactgcaaagcctacaatgctgactttgatggagacgagatgaatgcccacttcccccag
agtgagctgggccgggccgaagcctctgtcctggcctgcacggatcagcaataccttgtt
cccaaggatggccagccattggcaggcttgatccaggatcacatggtttcaggtgcaaac
atgaccactcgaggttgctttttcaaccgggagcagtacatgcaactggtataccgagga
ctcacagacaaagtggggcgcgtgaagttctttcctcctgccatccgaaagccttttcca
ctatggacgggaaagcaggtcgtgtcgacgctgctcataaacataatcccagaggagcac
atcccattgaatttatcgggcaaggcgaagatcagcgggaaagcctgggtgaaggagtct
cctcgacctgttcctggctttaaccccaactccatgtgcgagtcccaggtgatcatcagg
gaaggggagctgctctgcggagtgctggacaaagcacactatgggagctctgcctacggc
ctggtccactgctgctatgagatctatggagggcagaccagtggcaaggttctcacctgc
ctggcccgacttttcactgcctacctgcagctatacagaggcttcaccttgggcatggaa
gacatcttggttacacccaaggcagacggcaagagacacaggatcatcggcgagtccgcc
cactgtgggccccgggctgtcagggctgccttaaacctgccagaaactgcatcatgtgat
gaggtccaagggaaatggcaggatgcccatctgggcaaagaccagagggattttaacatg
atcgatctgaagttcaaggaggaagtgaaccattacagtaatgagattaacaaggcatgc
atgccttttggcctgcacagacagttcccagagaacaacctgcagatgatggtgcagtct
ggagccaaaggttcaactgtgaacaccatgcagatttcatgcctactgggccagattgaa
ttggaaggtcggagacccccactgatggcgtctggcaagtcactgccctgctttgagcct
tatgaattcacccccagggctggcggttttgtcactggcagattcctcactggcatcaag
cctcctgagttcttctttcactgcatggcagggcgagagggtctggtcgacaccgctgtg
aaaaccagccgctctggctacctccaaaggtgcatcatcaagcacctggaggggctggtt
gtccagtatgacctgacagtccgcgacagtgacggcagcgtggtacagttcctgtatgga
gaggatggtctggacatccccaagacacaattcctacagcccaagcagtttcccttcctc
gccagcaactacgaggtaataatgaaatcgaagcatctccatgaagttttatccagagca
gatccccaaaaagctctccgccacttcagagccatcaaaaaatggcagaacaagcattct
aacaccttgctgagaaaaggcgccttcttgagttattcccagaaagttcgggaagctgtg
aaagccttgaacctccaggatgccaaccagcatggccgcagccccgggacttaccagatg
ctgaggatgtggggtgagttagatgagcagagtcgaaggaaataccagaagaaggcggct
ccttgtcctgaccccagtctgtctgtctggcgcccggacatctactttgcatcagtgtca
gaaacatttgaaaaaaagatggatgactacagttgcgagtgggcatcccaagcagagaag
agttatgagaaatcagagctttcccttgacaggttgaggaccctgctgcagctgaagtgg
cagcgctcactgtgtgacccgggcgaggcggtgggcctgctggccgcccagagcatcggg
gagccctcgacacagatgactctgaacaccttccacttcgctggcagaggcgagatgaat
gtcactctgggcattccgaggttgagggagattctcatggtggccagcgccaacatcaag
acacccatgatgagtgtgcccgtgctcaacaccaaaaaagcactgaagagagtgaaaagc
ctgaagaggcagctcaccagagtgtgcttaggggaggtgttgcagaaaattgatgtccag
gagaccttctgtatgggagaaaagcagaacaagtctcgcatgtaccagctgcggtttcat
ttcctgccacatgcatattaccagcaagagaagtgcctgaaacctaaggacatcctgcac
ttcatggaaacaagattctttaaaattcttatggaatccatcagaaagaagaatagcaaa
gcatcagctttcagaagcgtgaacactcgaagagctacccagcgggacctagacaatgct
ggagagtcagagaggaatcagggtgagcaggaaggtgatgaggaagaggaggggcacatc
gtggatgccgaagctgaagagggagacgctgatgcctctgacatcaaacgcaaggagaag
caagaggaggaggttgattatgagagcgaggaagagggagagaaggagggagaggagaat
gacgacgaggaggatgtgcaggaggaaggaaacgtttgtggggagggcgcccacagggcc
caggagcaggacgaagaagtgggctcaagccccgaggagaactcgccccctgctccagcc
ccgagacagcaccggaaacccacctgcaacccagagccccagggagctgaggccgtggaa
caccgggtgcaggccgtgcgtgaatcccacccgttcatagaggactaccagtatgactcc
gaggagagcctgtggtgccaggtgacagtgaagctccctctaatgaaggttaattttgat
atgagctccctggtagtgtccttggcccatagcaccgtcatctatgcgaccaagggcatc
acgaggtgcctcctgaatgaaaccaccaccaacaagaacgagaaggagcttatcttaaac
acagaaggaatcaacctgccagagcttttcaagtatgctgaggttctggatttgcgccgc
ctgtattccaatgacatccacgcgatggccagcacctatggcatcgaggctgcgctgcgg
gttatcgagaaggagatcaaggacgtgtttgccgtgtacggcattgcagtcgatccccgc
catctttccctggtcgcggactatatgtgcttcgaaggtgtttacaagccactgaaccgc
tttgggatccggtcaaattcgtcccctctacaacagatgacgtttgaaaccagcttccag
ttcctgaaacaagccaccatgatgggatcccatgacgagctgaggtccccttccgcctgc
cttgtggttggaaaggtcgtcaagggtggaacgggcctattcgaactcaagcagcccctg
agatag
DBGET
integrated database retrieval system
