Pteropus vampyrus (Indian flying fox): 120595656
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Entry
120595656 CDS
T07511
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgig03009
]
120595656 (DCAF13)
04121 Ubiquitin system [BR:
pgig04121
]
120595656 (DCAF13)
Ribosome biogenesis [BR:
pgig03009
]
Eukaryotic type
90S particles
Other 90S particles
120595656 (DCAF13)
Ubiquitin system [BR:
pgig04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120595656 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
eIF2A
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
120595656
NCBI-ProteinID:
XP_039709853
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKVKMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPKSLATVLSGACDGEIRIWNLTKRNCIRTIQAHEGFVRGICTRFC
GTSFFTVGDDKTVKQWKMDGPSFGEEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDI
WDEQRTNPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKL
GVLTSREKAAKDYNQKLKEKFQYHPHVKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVN
RLKHSKPGSVPIVSERKKHIVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaaatgctgagccggaacccggacaactatgttcgcgaaaccaagttggac
ttacagagagttccaagaaactatgatcctaccttacaccccttcgaggttccacgagaa
tacgtaagagctttaaatgctaccaaactggaacgggtatttgcaaaaccgttccttgct
tccctggacggtcaccgagatggagtcaattgcttggcgaagcatccaaagagcctggct
actgtcctttctggggcatgtgatggagagattagaatttggaacttgactaaacgaaac
tgtatccgtacaatacaagcacatgaaggttttgtacgtggaatatgtactcgcttttgt
gggacttctttttttactgttggtgatgataaaactgtgaagcagtggaaaatggatgga
ccaagctttggagaagaggaagaaccattgcatacaatattaggaaagacagtgtataca
ggaattgatcatcactggaaagaagctgtttttgccacatgtggacagcaagtagacatt
tgggatgaacaaagaaccaatcctatatgttcaatgacctggggatttgacagtataagt
agtgttaagtttaacccaattgagacatttctcttgggaagttgtgcttctgacaggaat
atagtactatatgacatgaggcaagctactcctctgaaaaaggtcatcttagatatgaga
acgaatacaatttgttggaaccctatggaagctttcatttttactgcagcaaacgaagat
tacaacttgtatacttttgatatgcgtgcactggacactcctgtaatggtacatatggat
catgtatctgcggtgcttgacgttgattactctcccactgggaaagagtttgtgtctgct
agttttgataaatctattcgaatctttcctgtggacaaaagtagaagcagggaagtctat
cacacaaagagaatgcagcatgttatctgtgtaaaatggacttctgacagcaagtatatt
atgtgtggatctgatgaaatgaacattcgtctgtggaaagctaatgcttctgaaaaattg
ggtgtgcttacatcacgagaaaaagcagccaaagattataaccagaagttgaaggagaaa
ttccagtatcatcctcatgtaaaacgaatcgctcgtcaccgacatctaccaaaatctatc
tacagccagatccaggaacagcgcattatgaaagaggctcgtcggcgcaaggaagtaaat
cgactcaaacatagcaagcccggatctgtgccaattgtgtcggagaggaagaaacacata
gtggcagttgtgaaataa
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