Pteropus vampyrus (Indian flying fox): 120596166
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Entry
120596166 CDS
T07511
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03082
ATP-dependent chromatin remodeling
pgig04714
Thermogenesis
pgig05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120596166 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
120596166 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
120596166 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgig03000
]
120596166 (ARID1A)
03021 Transcription machinery [BR:
pgig03021
]
120596166 (ARID1A)
03036 Chromosome and associated proteins [BR:
pgig03036
]
120596166 (ARID1A)
Transcription factors [BR:
pgig03000
]
Eukaryotic type
Helix-turn-helix
ARID
120596166 (ARID1A)
Transcription machinery [BR:
pgig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120596166 (ARID1A)
Chromosome and associated proteins [BR:
pgig03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120596166 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
120596166
NCBI-ProteinID:
XP_039710478
LinkDB
All DBs
Position
Unknown
AA seq
2275 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAVAAAERGEMKAAAGQESEGPS
VGPPQPLGKELQDGAESNGGGGGGGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGGGGS
SDGVGAPPHSAAAALPPPAYGFGQTYGRSPSAVAAAAAAVFHQQHGGQQSPGLAALQSGG
GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPGSGAAAAA
GSKPPPSSSASASSSSSSFAQQRFGAMGGGGPTAAGGGTPQPTATPTLNQLLTSPSSARG
YQGYPGGDYGSGPQDGGAGKGPADMASQCWGAAAAAAAAAASGGAQQRSHHAPMSPGSSG
GGGQSLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQ
RYPMTMQGRAQNTMGGLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQ
PPSQTPHAQPSYQQQQQSQPPQLQSAQPPYSQQPSQPPHQQSPTPYPSQQSTTQQHPQSQ
PPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSF
GSQASSTPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISS
SQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRP
PSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPSSALSPRQPSGGQMHTGMGSY
QQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGGQMHGQPGIP
PYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAANSI
QNRPPGYPNMNQGGIMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSAGMAASPEMM
GLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYL
AFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSA
ASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQ
STSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPTFQKRNSMTPN
PGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGL
GNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSGMYSPSRYPPQQ
QQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDATYGPPAKRHDGEMY
SVPYSTGQGQPQQQQLPPAQPQPTTQQQAAQPSPQQDVYNQYGNAYPATAAAAAERRPAS
GPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMTYNYA
NRQSTGSAPQGPAYHGVNRTDEMLHTDQRPNHEGPWPSHGTRQPPYGPSAPVPPMTRPPP
SNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAP
VQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALD
TINILLYDDNSIMTFSLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPGR
FSKASSPAPVEGEDEEDLLGPQLEEEEEEEVAENDEEMAFSGKDKAASENSEEKLTSKFD
KLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELLPIWP
HVPCLSVTRKHVTAAEGTPGTTEQEGPPLDGPPEKRITATMDDMLSTRSSTLTEEGSKSA
EATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRS
LSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWW
DCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNA
VLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVL
LANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPTSVDM
MRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6828 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcgggaggaggcggggggcgaggcggcggtg
gcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggcccctcc
gtggggccgccgcaaccgttgggaaaggagctgcaggacggggccgagagcaatgggggt
ggcggcggcggcggcggcgggcccggcgcggagccggacctgaagaactcgaacgggaac
gcgggccctaggcccgccctgaacaataacctcacggagccgcccggcggcggcggcagc
agcgatggggtgggggcgcctcctcactcagccgcagccgccttgccgcccccagcctac
ggcttcgggcaaacctacggccggagcccgtctgctgtcgccgccgcggcggccgccgtc
ttccaccaacaacatggcggacaacaaagccctggcctggcagcgctgcagagcggcggc
ggcggcgggggcctggagccctacgcggggccccaacagaactcacacgaccacggcttc
cccaaccaccagtacaactcctactaccccaaccgcagcgcctaccccccgcccccccag
gcctacgcgctgagctcccctagaggtggcactccgggctccggcgcggcggcggccgcc
ggctccaagccgcctccctcctccagcgcctctgcctcttcgtcgtcttcgtccttcgct
cagcagcgcttcggggccatggggggaggcggccccacagcggccggcgggggaaccccc
cagcccaccgccacccccactctcaaccaactgctcacgtcgcccagctcggcccggggc
taccagggctaccccgggggcgactacggcagcgggccccaggacgggggcgccggcaaa
ggcccggcggacatggcctcacagtgctggggggctgctgctgcggcggcggcggcagcc
gcctcgggaggggcccaacaaaggagccaccacgcgcccatgagccccgggagcagcggc
ggcggggggcagtcgctcgcccggaccccgcagccatccagtcctatggatcagatgggc
aagatgagacctcagccatatggtggaactaacccatactcgcaacaacagggacctcca
tcaggaccgcagcaaggacatgggtacccaggacagccatatgggtcccagaccccacag
cggtaccctatgaccatgcagggccgggcacagaataccatgggcggcctctcttatgca
cagcagattcctccttatggacaacaaggccccagcggatatggtcagcagggccagact
ccatattacaaccagcaaagtcctcacccccagcagcagcagccaccctactcccagcaa
ccaccatcccagacccctcatgcccaaccttcatatcagcagcagcaacagtctcagcca
ccacagctccagtccgctcagcctccatattcccagcagccatcacagcctccacatcaa
cagtctccaactccgtacccctctcagcagtctacaacccagcagcatccccagagccag
cccccctactcacagccacaggcgcagtctccctaccagcagcagcaacctcagcagcca
gcatcctcgacgctctcccagcaggctgcataccctcagccccagtctcagcagtcacaa
caaactgcctattcccagcaacgcttccctccaccacaggagctatctcaagattcattt
gggtctcaggcatcctcaactccctcaatgacctccagtaaaggagggcaagaagatatg
aacttgagtcttcagtcaagaccctcaagcttgcctgatctgtctggatcaatagacgat
ctccccatggggacagaaggagctctgagccctggagtgagcacatcagggatttccagc
agccaaggagagcagagtaatccagctcagtctcctttctctcctcatacctcccctcac
ctgcctggcatccgaggcccctccccgtcccctgttggctctcccgccagtgttgctcag
tctcgctcaggaccactctcgcctgctgcagtgccaggcaaccagatgccacctcggcca
cccagtggccagtcggacagcataatgcatccttccatgaaccaatcgagcattgcccaa
gatcgaggttacatgcagaggaaccctcagatgccccagtacagttccccgcagcccagc
tcagccttatctccgcgtcagccttctggaggacagatgcacacaggcatgggctcctac
cagcagaactccatggggagctatggtccccaggggagtcagtacggcccacagggaggc
tatcccaggcagccaaactataatgccttgcccaatgctaactaccccagtgcaggcatg
gctggaagcatgaaccctatgggtgctggaggtcagatgcatgggcagcctggcatccca
ccttatggcacactccctccagggagaatgagtcacgcctccatgggtaaccgcccttat
ggccctaacatggccaatatgccacctcaggttgggtcagggatgtgtcccccaccaggg
ggcatgaaccggaaaactcaagaaactgctgtcgccatgcatgttgctgccaactctatc
caaaacaggccaccaggctaccccaatatgaatcaagggggtataatgggaactggacct
ccctatggacaagggattaatagtatggctggcatgatcaaccctcagggacccccatat
cccatgggtggaaccatggccaacaattcagcagggatggcagccagcccagagatgatg
ggccttggggatgtcaagttaactccagccaccaaaatgaacaacaaggccgatgggaca
cccaagacagaatccaaatccaaaaaatccagttcttctactacaactaatgagaagatc
accaagttgtatgagctgggtggtgagcctgagaggaagatgtgggtagaccgttatctg
gccttcacggaggagaaggccatgggcatgacaaatctgcctgctgtgggtaggaaacct
ctggacctctatcgcctctatgtatctgtgaaggagattggtggattgactcaggtcaac
aagaacaaaaaatggcgagaacttgcaaccaacctcaatgtgggcacctcaagcagtgct
gccagctccttgaaaaagcagtatatccagtgtctctatgcctttgagtgcaagattgaa
cggggagaagaccctcccccagacatatttgcagctgctgattctaagaagtcccagccc
aagatccaacctccctctccagcgggatcagggtctatgcaggggccacagacacctcag
tcaactagcagttccatggcagaaggaggagacctgaagccaccaactccagcatccacg
ccacacagtcagatcccccccttgccaggcatgagcaggagcaattcagtcgggatccag
gatgcttttcctgatggaagtgaccccacattccagaagcggaattccatgactccaaac
cctgggtaccagcccagtatgaatacctctgacatgatggggcgcatgtcctacgagcca
aataaggatccttatggcagcatgaggaaagctccagggagtgatcccttcatgtcctca
gggcaaggccccaacggtggaatgggggacccctacagccgagctgctggccctgggctg
ggaaatgtggcgatgggaccacgacagcactatccctatggaggtccttatgacagagtg
aggacggaacctggaataggacctgagggaaacatgggcactggagccccacagccgaat
ctcatgccttccaacccagactcggggatgtattcccctagccgctaccccccacagcaa
cagcagcagcagcaacgacatgattcctatggcaatcagttctccactcaaggcacccct
tccggcagccccttccccagccagcagaccacaatgtatcagcagcagcagcagaattac
aagcggccgatggatgccacatatggccctcctgccaagcggcatgacggggagatgtac
agtgtgccatacagcacagggcaggggcagccccagcagcagcagctgcccccagcccag
ccccagcccaccactcagcaacaagctgcccagccttcccctcagcaagatgtatacaac
cagtatggcaatgcctatcctgccaccgccgctgctgctgccgagcgccgaccagcaagt
ggcccccagaaccagtttccattccaatttggccgagaccgtgtctctgcaccccctggc
tcgaatgcccagcagaatatgccaccgcaaatgatgggaggccccatacaggcatcagct
gaggttgctcagcaaggcaccatgtggcaggggcgcaatgacatgacctacaattatgcc
aacaggcagagcacaggctctgccccccagggccccgcctatcatggcgtgaaccgaaca
gatgaaatgctgcacacggatcagaggcccaaccatgaaggcccgtggccttcccatggc
acacgccagcctccatatggtccctctgcccccgtcccccccatgacaaggccccctcca
tccaactaccagcccccgccaagcatgcagaatcacattcctcaggtatccagccctgct
cccctgccccggccaatggagaaccgtacttctcctagcaagtctccattcctgcactct
gggatgaagatgcagaaggcaggtcccccagtacctgcctcgcacatagcacctgcccct
gtgcagccccccatgattcgacgggacatcaccttcccacctggctctgtcgaagccaca
caacctgtgttgaagcagagaaggcggctcaccatgaaagatatcggaactccagaggca
tggcgggtaatgatgtccctcaagtctgggctgctggcagagagcacatgggcattagat
accattaacatcctactgtatgatgacaacagcatcatgaccttcagcctgagtcagctc
ccagggttattagagctccttgtggaatatttccgacgttgcctgattgagatctttggc
attttaaaggagtacgaggtgggtgacccagggcagagaacactactagaccctgggaga
ttcagcaaggcgtctagtccagcccctgtggaaggggaggatgaagaagaccttctaggt
cctcaactagaggaggaggaagaagaggaagtagctgaaaatgatgaggagatggccttt
tcaggcaaagataaggcagcctcagagaatagtgaggagaaacttactagtaagtttgac
aagcttccagtaaagatcgtgcagaagaatgacccatttgtggtggactgctcagataag
cttgggcgcgtgcaggagtttgacagtggcctgctgcactggcggattggtgggggggac
accactgagcatatccagacccactttgagagcaagacagagctgctgcctatctggcct
catgtgccctgcctgtcagtcacacggaagcatgtcacagcagcagagggtacaccaggg
acaacagaacaggagggccccccactagatggccctccagaaaaacggatcacagctact
atggatgacatgttgtccacccggtctagcacattgaccgaggagggatctaagagtgca
gaggccaccaaggagagcagcaagtttccattcggcatcagcccagcacagagccatcgg
aacatcaagatcctagaggatgaaccccacagtaaagacgagaccccactgtgtaccctt
ctggactggcaggattcccttgccaagcgctgcgtctgtgtctccaataccattcgaagc
ctgtcgtttgtgccaggcaacgactttgagatgtccaaacacccggggctgctgctgatc
ctgggcaagctgatccttctacatcacaaacatcccgaacggaagcaggcaccactaact
tatgagaaggaggaggagcaggaccaaggggtgagctgcaacaaagtggagtggtggtgg
gactgcttggagatgctccgggaaaacaccttggttacacttgccaacatctcggggcag
ttggacctctccccataccccgagagcatttgcctgcctgtcctggacggactcctacac
tgggcagtctgcccttcagctgaagcccaggaccccttctccaccctgggccccaatgcc
gtcctctccccccagagactggtcttggaaaccctcagcaaactcagcatccaggacaac
aatgtggacctgatcctggccaccccacccttcagccgcctagagaagttgtatagcacc
atggtgcgcttccttagtgaccgaaagaacccggtatgccgggaaatggccgtggtactg
ctggccaacctggcgcaaggcgacagcctagcagcccgtgccatcgcagtgcagaagggc
agcatcggcaacctcctgggcttcctggaggacagccttgctgccacacagttccagcag
agccaggccagcctgctccacatgcagaacccacccttcgagccaactagtgtggacatg
atgcggagggctgcccgcgcactgctggccctggccaaggtggatgagaaccactcagag
ttcacgctgtacgagtcacggctgttggacatctcagtatcaccgttgatgaactcgttg
gtttcacaagtcatttgtgatgtactgtttctgattggccagtcatga
DBGET
integrated database retrieval system
