Pteropus vampyrus (Indian flying fox): 120597161
Help
Entry
120597161 CDS
T07511
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120597161 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgig03041
]
120597161 (PRPF40A)
Spliceosome [BR:
pgig03041
]
Complex A
U1 snRNP components
U1 related factors
120597161 (PRPF40A)
Complex B
120597161 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
120597161
NCBI-ProteinID:
XP_039711828
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQT
KESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEESSKQEECTTASTAPVPTTEI
PTTMSTMAAAEAAAAVVAAAAAAAAAAAAANASASTSASNTVGGTVPAVPEPEVTSIVAT
VVDNENTVTISTEEQAQLTSTPAVQDQSVEVSSNAGEETSKQETLADFTPKKEEEESQPA
KKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAY
KVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDR
LEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFA
EDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEH
GQLHSMSSWMELYPTISSDIRFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIK
DILKDKGFVVEVNTTFEDFVAVISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEA
RKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVL
EHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSA
ESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKERTRQRSESKHKSPK
KKTGKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtggactgaacataaatcacctgatggaaggacttactactacaatactgaaacaaaa
cagtctacttgggagaaaccggatgatcttaaaacacctgctgagcaacttttatctaaa
tgcccctggaaggaatacaaatctgactctggaaagccttactattacaattctcaaaca
aaggaatcccgctgggccaaacctaaagaacttgaggatcttgaaggataccagaatacc
attgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaagaa
agcagtaagcaagaggagtgcaccacagcatcaacagccccagttcctacaacagaaatt
ccgaccacaatgagcaccatggctgctgcagaagcagcagctgctgtcgttgcagcagcc
gccgctgccgcagcagccgccgctgcagccaatgccagtgcttccacctctgcttctaat
acagtgggtggaactgttccggctgttcctgagcctgaagttacttcaattgttgctacc
gttgtagataatgaaaacacagtaacaatttcaactgaggaacaagcacaacttactagt
acccctgctgttcaggatcaaagtgttgaagtgtctagtaatgctggggaagaaacatca
aagcaggaaaccttagctgattttactcccaagaaagaagaggaggaaagccaaccagca
aaaaaaacatatacttggaatacaaaggaggaggcaaagcaagcatttaaagaattattg
aaagaaaagcgggtaccatctaatgcttcatgggagcaagctatgaaaatgatcattaat
gacccacgatacagtgctttagcaaagttgagtgaaaaaaagcaggcctttaatgcttat
aaagtccagacagagaaagaagaaaaagaagaagcaagatcaaagtacaaagaggctaag
gaatcctttcagcgttttcttgaaaatcatgagaaaatgacttccacaaccagatacaaa
aaagcagagcaaatgtttggagagatggaagtctggaatgcaatatcagaacgtgatcgt
cttgaaatctatgaagatgttttattctttctttcgaaaaaagaaaaggagcaagcaaag
caattgcgaaagagaaattgggaagccttaaaaaacatacttgacaacatggctaacgta
acatactcaactacttggtcagaagcccagcagtatctgatggataatccaacttttgca
gaagacgaggaattacagaacatggataaagaagatgcattaatttgctttgaagaacat
attcgtgctttagaaaaggaagaagaagaagaaaaacagaagagtttgctgagagaaagg
agacgacagcgtaaaaacagagaatcttttcagatatttttagatgagctgcatgaacat
ggacaactgcattctatgtcatcttggatggaattgtatccaacaattagttctgacatt
agattcactaatatgcttggtcagcctgttttttcattaggatcaactgcacttgacctt
ttcaagttttatgttgaggatcttaaagcacgttatcatgatgagaagaagataataaaa
gatattctaaaggataaaggatttgtagttgaagtaaatactacttttgaagactttgtg
gcagtaatcagttcaactaaaagatcaaccacactagatgctgggaacattaagttagct
tttaatagtttactagaaaaggcagaagcccgtgaacgtgaaagagaaaaagaggaggct
cggaagatgaaacgaaaagaatctgcttttaagagtatgttgaaacaagctactcctcca
atagaattggatgctgtctgggaagatatccgggagagatttgtaaaagagccagcattt
gaggacataactctagagtctgaaagaaaacgaatatttaaagattttatgcatgtgctt
gagcatgaatgtcagcatcatcattcaaagaacaagaaacattctaaaaaatctaaaaaa
catcacaggaaacgttcccgttctcgatcggggtcagattcagatgacgacgacagccat
tcaaagaaaaaaagacagcgatcagagtctcgttctgcttcagaacattcttctagtgct
gagtctgagagaagttacaagaagtcaaaaaaacataagaagaaaagcaagaagaggagg
cataaatctgactctccagagtcagatgctgagcgagagaaggataaaaaagagaaagac
cgggaaagcgaaaaagagagaactagacaaagatcagaatcaaaacacaaatcacctaag
aaaaagactggaaaggattctggtaattgggatacttctggcagtgaactgagtgaaggg
gaattggaaaagcgcagaaggacccttttggagcaactggatgatgatcaataa
DBGET
integrated database retrieval system
