Pteropus vampyrus (Indian flying fox): 120598833
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Entry
120598833 CDS
T07511
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgig03021
]
120598833 (SCAF4)
03041 Spliceosome [BR:
pgig03041
]
120598833 (SCAF4)
Transcription machinery [BR:
pgig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120598833 (SCAF4)
Spliceosome [BR:
pgig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
120598833 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120598833
NCBI-ProteinID:
XP_039713838
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSELPQATTNSVPTVPQLP
SSDAFAAVAQLFQSTQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAITAQLKTAPAQP
PEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAMEESKKEDAAATAATTTSAVVIVPPAPA
ATAAAAVTPATSPPQAPFGFPGDAMQQPAYTQHQNMDQFQPRMMAIQQDPVHHQVQLPPN
GQMPGFGLLPTPPFPPMAQSVIPPTPPVQQPFQASFQSQNEPLTQKAHQEMEVEQPCIQE
VKRHISDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRD
REKERERRQKGLPPIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPR
GCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIP
WDKVKPEELESFCEGGMLDSDTLNPEWKGIPKKHENEVAQNGGAETSHTEPVSPIPKPLP
VPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPF
LRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNP
IPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQA
PSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFGMPPPHG
MKGPFPPHSPFVRPGGMPGLGGPGPGPGGPEDRDGRQQQPQQQQQQPPPQPQPQQPPPTQ
QPPPTQQQTQPFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDSSNRERR
EWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEENRGKEKPEVTDRAGGNK
IVEPSISQVGNVDTASELDKGEPESAIVKPSEELPAEATSSVEPEKDSGSAAEAPR
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaacctccc
atctctcgagccaagatgattcttatcacaaaagctgctatcaaagccattaagctttat
aagcatgtagttcaaatagtagaaaaattcatcaaaaagtgtaaaccagaatacaaagtt
ccaggattatatgtaatcgactcaattgtgcgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataactgccacattccaatatttatat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctgaacctttggcagaaaaat
ggagtattcaaaattgaaattattcaacctcttttggacatggcagcaggaaccagtaat
gctgccccagtggcagaaaatgttactaataatgaaggttcacctccacctccagttaaa
gtttcttctgaactcccacaagccactacaaactctgtaccaactgtaccacagttgcct
agctctgatgcttttgctgctgtggcccaactgtttcagtcaactcaaggtcaacagctt
cagcagatccttcagacttttcagcagcctccaaaaccacagtctcctgccattgacaat
gccgtgatggctcaggttcaggctatcacagctcagttaaagacagctcctgcacaacca
cctgaacaaaaagctgctttccccccacctgaacaaaaaactgcatttgacaagaagcta
cttgatagatttgactatgatgatgagccagaagctatggaagaatcaaagaaagaagat
gctgctgctactgctgccaccacaacatctgccgttgtgattgtgccgcctgctccggct
gcaacggcagctgctgcagtcacacctgctacttctcccccacaggctcccttcgggttt
cctggagatgccatgcagcagccagcatatacccaacatcaaaatatggatcagtttcaa
cctcgaatgatggcaatacagcaggatccagtgcaccatcaggttcaacttcctcctaat
ggacaaatgccaggatttggccttcttcctacacctccatttcctcccatggctcagtct
gtgattcctccaactccacctgttcagcagcctttccaagcttcttttcagtcacaaaat
gaaccacttacgcagaaggcacatcaggaaatggaagtagaacaaccttgtattcaagaa
gttaagcggcatatctctgataacagaaagtcaagatctaggtcagcatccaggtcgcca
aaaaggaggcgatctcgatctggttctagatctcgaaggtctcgtcatcgacgttctaga
tctcggtctagagatagacgccgacattctcctagatctcgatcccaagaaagacgggat
cgagaaaaagaaagagaacgccgacaaaaaggccttcctccaatcaaatcagaaactgca
agtgtttgtagtactacactctgggtgggacagctggacaaaaggactactcagcaggat
gttgccagtctcttagaagaatttggtccaattgaatcaattaatatgattcctcccaga
ggttgtgcctatattgttatggttcataggcaagatgcatatcgtgccctgcagaaactg
agccgaggaaactataaagtgaaccagaaatccataaagattgcctgggccttaaataaa
ggaataaaggcagattataaacagtattgggatgtagaacttggtgttacttatattcca
tgggacaaagtcaagcctgaagaactggagagtttttgtgaaggaggaatgttggatagt
gatacacttaatccagagtggaaaggaattcccaagaagcatgaaaatgaagttgctcaa
aatggaggggcagaaacctcacacacagaaccagtatcacccatacccaaacctttacct
gtgcctgtccctcctattcctgttcctgcacctataacagtaccgcctccacaggtccca
ccacatcagccaggtcctccagtagtcggtgctctccagccacctgctttcacgccgcct
ctgggaatcccccctcccggctttggacctggtgttcctcctcctcctcctcctccattt
ttgcgtccaggattcaacccaatgcatttaccaccaggttttcttcctcctggaccccca
cctcctataactccaccagtatccattcctcctcctcacactccaccaataagcatccca
aactctactatcgctggtataaatgaagacactacaaaagacttatctattggaaatccc
attccaacagtggtgtctggggctagaggaaacgccgagtctggtgacagtgtgaaaatg
tatggctctgccgtgccacctgctgcacccacgaatctacccacccctcctgtaactcag
cctgtttcacttcttggtactcaaggagttgcacctggtcctgtaattgggctccaggca
ccgtctactggcctccttggagcccgacctggcctgatcccactccagcgcccgccagga
atgcctccacctcatttacagcgatttcctctgatgccgcctcgtcccatgccaccgcac
atgatgcacagaggtccaccgccaggccccgggggctttgggatgcctccacctcatgga
atgaaaggtccctttccaccacacagcccctttgttaggcctggtggaatgccagggctt
gggggcccgggcccgggcccgggaggtcctgaagacagagacggaaggcagcaacagcca
cagcagcagcagcagcagccgccaccacaaccacaaccgcagcagccaccaccaactcag
cagccaccaccaacgcagcagcaaacgcaaccgtttagaaatgataacaggcagcagttc
aattcaggtagagaccaagaaaggtttggaagaagatctttcggaaatagggtggaaaat
gaccgggaacggtatgggaaccgtaatgatgatagagatagtagtaatcgtgaaaggaga
gagtggggaagaaggagccctgaccgggacagacacagagacttggaagagagaaataga
cgttctagtgggcatcgagacagagagagagattctagagatagagagtctcgtagagag
aaggaagaaaaccgaggaaaggaaaagcctgaggtgacagacagggcaggtggtaacaaa
attgttgaaccttccattagccaagtgggaaatgtagacactgcttcagaacttgataag
ggggagccggagtctgcaatcgtaaaaccttctgaagagttacctgctgaggctacctca
tccgttgaacccgaaaaggattccggctcagcagcagaggctcctcgttag
DBGET
integrated database retrieval system
