Pteropus vampyrus (Indian flying fox): 120599032
Help
Entry
120599032 CDS
T07511
Symbol
XAB2
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120599032 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120599032 (XAB2)
03041 Spliceosome [BR:
pgig03041
]
120599032 (XAB2)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120599032 (XAB2)
Spliceosome [BR:
pgig03041
]
Complex B
Other components
Prp19-related factors
120599032 (XAB2)
Complex C
120599032 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
Suf
TPR_2
TPR_8
TPR_19
TPR_15
ARM_TT21_C
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
120599032
NCBI-ProteinID:
XP_039714053
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MSLDQRRGGACRAIRHSNATPACSWKARKMVVMARLSRPERPDLVFDEEDLPYEEEIMRN
QFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKPRCVTDPA
YEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPL
YLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVS
KAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGH
FEKAXDVAKXAIRTVMTVRDFHAGVDSYAQFEGSMIAARWNCLRAGAGRRSENDVDLELR
LARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKA
TGKPHTLWVAFAKFYEDNGQLDDARIILEKATKVSFKQVDDLASVWCECGELELRHENYD
QALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRI
LDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGG
RKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYD
MFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSF
CSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQATYNTQVNFMASQMLKVSG
SATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPPRAQNKILFVRSDASREELAEL
AQQANPEEIELGEDEDEDEMDLEPNEVRLEQQSVPAAVFGSLKED
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggatcagaggcggggcggggcatgcagagcgatacgtcattctaacgcgact
ccggcctgcagctggaaagccaggaaaatggtggtgatggcgcgactctcgcggccagag
cggccggaccttgtctttgatgaagaggacctcccctatgaggaagaaatcatgcggaac
cagttctccgtcaaatgctggctccgctacatcgagttcaaacagggagccccgaagccc
cggctcaatcagctgtatgagcgcgcgctcaagctgctgccctgcagctacaaactctgg
taccgctacctgaaggcacgccgggcacaagtgaagccccgctgtgtgactgaccctgcc
tacgaagatgtcaacaactgccacgagagggcatttgtgtttatgcacaagatgccacgt
ctgtggctagactattgccaattcctgatggaccaaggccgcgtcactcacacccgccgc
acttttgaccgtgccctgcgggcactgcccatcacacagcactctcgtatttggcccctg
tacctgcgcttcctgcgctcacacccactgcctgagacagctgtgcggggctaccggcgc
ttcctcaagctgagtcctgagagcgcagaggagtacatcgagtacctcaagtcgagcgac
cggctagacgaggctgcacagcgcctggccaccgtggtaaatgacgagcgcttcgtctcc
aaggccggcaagtccaactaccagctgtggcacgagctctgtgacctcatctcccagaac
ccggacaaagtgcagtcgctcaacgtggacgccatcatccgtgggggcctcactcgcttc
accgaccagctgggcaagctctggtgctcgctggccgactactacatccgcagtggccac
ttcgagaaggcttgagacgtggccaagtgagccatccggaccgtgatgaccgtgcgagac
ttccacgcgggtgttgacagctatgcccagttcgagggaagcatgattgcagctagatgg
aactgcctcagagctggggcgggaaggaggagtgaaaatgacgtggaccttgagctgcgc
ctggcccgctttgagcagctcattagccggcggcccctgctcctcaacagtgtcttgctg
cgccagaacccgcaccatgtgcatgaatggcacaagcgcgtggccttgcaccagggccgt
ccccgggagatcatcaacacgtacacagaggctgtgcagacagtggaccctttcaaggct
acgggcaaaccccacacactgtgggtagccttcgccaagttttatgaggacaacgggcag
ctggatgatgcccgcatcatcctagagaaggccaccaaggtgagcttcaaacaggtggat
gacctggcgagcgtgtggtgtgagtgtggcgagctggagctccggcacgagaattatgac
caggccttgcggctgctgcggaaggcgacagcgctgcctgcccgccgggctgagtacttc
gatggctcagaacctgtgcagaaccgcgtgtacaaatcactgaaggtgtggtccatgctt
gccgacctggaagagagccttggcacctttcagtctaccaaggccgtgtatgaccgcatc
ctggacctgcgcatcgccaccccccagatcgtcatcaactacgccatgtttctggaggag
cacaaatacttcgaggagagcttcaaggcatacgagcgtggcatctcactgttcaagtgg
cctaatgtgtcagacatctggagcacctacctgacaaaattcatcgcccgctacgggggc
cgcaagctggagcgggcgcgggacctctttgagcaggcgctggatggctgcccccctaaa
tacgcaaagaccttgtacctgctgtacgcacagctggaggaggagtggggcctggcccgg
cacgccatggctgtgtatgagcgcgccacccgggctgttgaacccgcccagcagtatgac
atgttcaatatctatatcaagcgggcagccgagatctacggagtcacccacacccgcggc
atctaccagaaagccatcgaggtgctatcggatgaacatgcccgggagatgtgcctgagg
tttgcagacatggaatgcaagctaggggagatagaccgagctcgagccatctacagcttc
tgttctcagatctgcgacccccggacaactggggccttctggcaaacatggaaggacttc
gaggtccggcatggcaatgaggacaccatccgggagatgctgcggatacgccggagcgtg
caggccacgtacaacacgcaggtcaacttcatggcctcgcagatgctcaaggtgtctggc
agcgccacaggcaccgtgtctgacctcgcccctgggcaaagcggtatggatgacatgaag
ctgctggagcagcgggcagagcagctggcagctgaggccgagcgcgaccagcccccgagg
gcccagaacaagatcctgtttgtgaggagcgacgcatcccgggaggagctggctgagctg
gcgcagcaggccaacccagaggagattgagctgggcgaggatgaggacgaggatgagatg
gaccttgagcccaatgaggtgcggctggaacagcagagcgtgccggccgcagtgttcggg
agcctgaaggaagactga
DBGET
integrated database retrieval system
