Pteropus vampyrus (Indian flying fox): 120600697
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Entry
120600697 CDS
T07511
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120600697 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120600697 (PATL1)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120600697 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
120600697 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
120600697
NCBI-ProteinID:
XP_039716112
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKP
PVAVSEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPLLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQDMPAVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCNV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPATPPPSQQHPPGPGPHLQNLRSQAPMFRPDTTHLHP
QHRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGDGPKKERTKLITPQVARLEHTYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIENTYSLLLDVEDY
ERRYLLSLEEERPALTDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVAR
ILPFLSTEQAADILMITARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQL
MNLPQSAAAPAPANPHLTAVLQSQFGLSLLLVVLSRGEDLQSSDPATETTENNQWTEVMF
MATRELLRIPQVALAKPVSIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaggatgcatttcag
ggcctgggagaggaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgactggctgaattggaagagaagcca
ccagtggcagtcagtgaacaaacaggcaatggagaaagggatgagatggacttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgatcgaaaatgaactagaa
gatccagctattatgagggcagtgcagaccaggccacttttgcaaccccaaccaggaagt
ctcaattctagcatctgggatggatctgaagttctgaggcgaatccgaggaccactcctt
gctcaggacatgcctgcagtgtctgtactagaatatgccttgcctcagaggcccccacag
ggcccagaggacgatcgggacctttctgagcgagcattaccaaggcggtcaacttcacct
atcattgggagccctcctgttagagccgtccccataggcaccccacctaagcagatggct
gtacccagcttcaaccaacagattctgtgtccgaagcctgtccatgttcggcccccaatg
ccaccacgctatcctgctccctatggtgagaggatgtctccaaaccagctctgcaatgtc
ccgaattcttccctactgggtcacccttttcctcctagtgttcctcctgtcctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccgcttgctgccatgaatcccaagttg
ctgcaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccaccccctgctacaccaccaccctcacagcagcacccccctggcccaggacctcac
ctgcaaaacctaagatctcaggccccaatgtttagaccagacaccactcacctccatcca
cagcaccgtcgactcttgcatcagagacagcaacagaatagaaatcagcaccggaatctc
aacggtgcaggagatagaggaagtcaccggagcagtcatcaagatcacctccgaaaggat
ccatatgccaatctcatgttgcagcgagaaaaggattgggtctctaaaattcagatgatg
caactgcaaagcactgatccctacctggacgatttttattaccagaattactttgaaaaa
ctggagaaactgtcagctgctgaagaagtgcaaggtgatggccctaaaaaggagcgcacc
aagctcattacccctcaggtggccagactggagcacacctataagccagtgcagtttgag
ggctctttgggaaagcttactgtctctagtgtgaataatccccggaaaatgattgatgct
gttgtgacatctcggagtgaggatgatgagacaaaagaaaaacaggttcgggacaagaga
cgaaaaacccttgtcataattgagaatacctacagtttgctcctcgatgtggaggactat
gaaaggcgttatctactaagtctggaagaagagagacctgccctgacagatgaaagaaag
cacaaaatttgtagcatgtatgacaacttaagggggaaattgcctggtcaggagaggcca
agcgacgaccactttgtacagatcatgtgtatccgaaaaggaaagagaatggtcgcccgt
attcttcctttcctctccacagagcaagcagccgacatcctcatgataacagccaggaac
ctccctttccttatcaagaaggacgcacaggatgaggtgctgccatgcttattgagtccc
ttctctctcctcctctatcatcttccatcagtgactgtcaccagccttctgcaacagctg
atgaacctacctcagagtgcagctgcaccagcccccgccaaccctcacctcactgctgtg
ctccagagccagtttggcctgtcactgctcctcgttgtcctgagccgcggggaagacctg
cagagttcagatcccgctacagaaacaacggaaaacaaccagtggacggaggtgatgttc
atggcaacccgagaacttctgcggattccccaggtggccctggccaagccagtctctatc
cccacgaacctagtatccctcttttctcgctatgttgaccggcagaaactgaacttgctg
gagacaaaactgcagctagttcaggggatacgataa
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