Pteropus vampyrus (Indian flying fox): 120603709
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Entry
120603709 CDS
T07511
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03015
mRNA surveillance pathway
pgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120603709 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
120603709 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120603709 (PABPC1L)
03041 Spliceosome [BR:
pgig03041
]
120603709 (PABPC1L)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120603709 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
120603709 (PABPC1L)
Spliceosome [BR:
pgig03041
]
Complex C
Other components
Complex C specific factors
120603709 (PABPC1L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_MUD2_C
RBD_DEAH11
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120603709
NCBI-ProteinID:
XP_039720351
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MNASGPIFPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS
TFGNILSCKVVCDDHGSRGFGFVHFETHEAAQLAISTMNGMLLNDRKVFVGHFKSRQERE
AELGARAMEFTNIYVKNLQVDMDEWGLQELFSQFGWSSPGKMLSVKVMRDDSGHSRGFGF
VNFEKHEEAQKAVMDMNGKEVRGRLLYVGRAQKRMERQNELKRKFEQMKQDRLNRYHGVN
LYVKNLDDSINDEKLRKEFSPYGMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG
RIVGTKPLYVALAQRKEERKAILTNQYMQRLSTVRALGGPLLGSFQQPANYFLPAVPQPP
AQAAYYGSGPPLQPAPRWTAQPPRSSSAYPPAASMVWTPATSRRPLAHVSSVRQASTQAP
QQVPHTQRVANIGTQTTGPNVVGCSMPGGPLLTHRYSLATPNTHGVQEPAVCIPGKEPLT
ASMLAAAPLHEQKQMIDWPPKWGLLCPLHSWERFLVSVSTPLSMTSTPSWLARSRACCWR
LTTQSCCSCWSLQSPSMPRSKRLWLCCRLTRPRSGRK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggcccaatctttccgctcgcctcgctctacgtgggcgacctgcacccc
gacgtaacggaggccatgctctacgagaagttctcgcctgccggccccatcctgtccatc
cgcgtgtgccgcgacgtggccacccgccgctcgctgggctatgcttatatcaacttccag
cagccagccgacgcggagcgggcactggacacaatgaactttgaagtgataaaaggccag
cccatccgcatcatgtggtcccagcgagacccaggacttcgcaagtcaggtgtgggcaac
atcttcatcaagaacctggaggactccattgacaacaaggccttatatgacaccttttcc
acctttgggaacatcctctcttgcaaggtggtgtgtgatgatcacggttcccgaggcttt
ggctttgtccattttgagacccatgaggctgcgcagctggccatcagcaccatgaatggg
atgctgctgaatgaccgtaaagtcttcgttggccacttcaagtcccgacaggagcgggaa
gccgagctgggggctcgggccatggagttcaccaacatctatgtgaagaacctccaagtg
gacatggatgagtggggcctgcaggagctcttctcccagtttggttggtcctccccaggg
aagatgctgagtgtgaaggtgatgagggatgacagcggccactcccggggctttggcttt
gtcaactttgagaagcatgaggaagcccagaaggctgtgatggacatgaacggaaaggaa
gtgagagggcggctgctctacgtgggccgggctcagaagcggatggagcggcagaatgaa
ctgaagcgcaagttcgagcagatgaagcaggaccggctgaaccgttaccatggcgtgaac
ttgtatgtgaagaacctagatgactccatcaatgatgagaaactaaggaaagaattctct
ccctatggaatgatcaccagtgccaaggtgatgacagagggtggccacagcaaagggttt
ggctttgtgtgtttttcctctccagaagaggcgacgaaggccgtgacagagatgaacggg
cgcattgtcggcaccaagccgctttacgtggccctggcccagcgcaaagaggagcggaag
gccatcttgactaaccagtacatgcagcgtctctccactgtgcgggccctgggtggcccc
ctcttgggctccttccagcagcccgccaactacttcctgcccgctgtgccccagcctcca
gcccaggctgcatactatggctctggcccacctcttcagcctgcccccaggtggacggcc
cagccgcccagatcctcgtctgcctaccctccggctgcctcaatggtttggacaccagcc
acgtcgcggcgtcccctggcccacgtcagcagtgttaggcaggcttccactcaggcacca
cagcaggtgccccacacccaaagagtggccaacattggtacccagaccactggacccaat
gtggtgggatgctcgatgccaggcgggcctctcttgacacacagatattctttggcgaca
cccaatacccatggggtccaggagcctgctgtgtgcatccctggaaaggagcccttgacc
gcgtccatgctggccgcagcacctttgcacgagcaaaagcagatgattgactggcctcca
aagtggggtttgctgtgcccacttcatagctgggagaggttcctggtgagcgtctctacc
cccttatctatgacgtccacacccagctggctggcaagatcacgggcatgctgctggaga
ttgacaactcagagctgctgctcatgctggagtctccagagtccctcaatgccaaggtcg
aagaggctttggctgtgttgcaggctcaccaggccacggagcggtcgaaagtga
DBGET
integrated database retrieval system
