KEGG   Pteropus vampyrus (Indian flying fox): 120603860
Entry
120603860         CDS       T07511                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
pgig  Pteropus vampyrus (Indian flying fox)
Pathway
pgig03013  Nucleocytoplasmic transport
pgig05014  Amyotrophic lateral sclerosis
pgig05164  Influenza A
Brite
KEGG Orthology (KO) [BR:pgig00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120603860 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    120603860 (RAE1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    120603860 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgig03019]
    120603860 (RAE1)
   03036 Chromosome and associated proteins [BR:pgig03036]
    120603860 (RAE1)
Messenger RNA biogenesis [BR:pgig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120603860 (RAE1)
Chromosome and associated proteins [BR:pgig03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120603860 (RAE1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_CDC20-Fz WDR55 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 120603860
NCBI-ProteinID: XP_039720615
LinkDB
Position
Unknown
AA seq 430 aa
MRLVSTVLEVVSSAGVSGPRLSGFRFAASRPLPFLGAAASQAPESSCSSQPASLRGATLR
ATMSLFGTTSGFGTGGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFNPPTLQGNFLI
AGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLGVCWSDDGSKVFTASCDKTAKMWDLNSN
QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADV
IYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEG
RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFS
FWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNA
AEELKPRNKK
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgccttgtctccacggtacttgaagtggtttcctccgccggcgtctcgggaccccgg
ctctcgggattccggttcgcggcttctcgccctctccccttcctcggcgcagcggcttcg
caggctccagaatcctcctgctcctcgcagccggcctccctccgcggcgcgactctcagg
gccacgatgagtttgtttggaacaacctcaggtttcggaactggtgggaccagcatgttt
ggcagcacaaccacggacaaccacaaccctatgaaggatattgaagtaacatcctctcct
gacgatagcatcggttgcctgtcttttaacccaccaaccttgcaggggaactttcttatt
gcaggatcatgggctaacgatgttcgctgctgggaagttcaggacagtgggcagacgatc
cctaaggcccagcagatgcacacggggcctgtgctgggggtgtgctggagcgacgatggg
agcaaagtatttacggcttcatgtgataaaactgccaaaatgtgggaccttaacagtaat
caagccatacagattgcacagcacgatgctcctgttaaaaccatccattggatcaaagca
ccaaactacagctgtgtgatgaccgggagctgggataagacactgaagttttgggatacg
cgatcatcaaatcctatgatggttttgcaactccctgaaaggtgttactgtgccgacgtg
atatatcctatggccgtggtggccactgcagagagaggactgattgtctatcaattagag
aaccaaccttctgaattcaggaggatagaatccccactgaaacaccagcatcgatgtgtg
gctatttttaaagacaaacagaacaagccgactggttttgccttgggaagtatcgagggg
agagttgctatccactacatcaaccccccgaatccagccaaagataactttacctttaaa
tgtcatcgatctaacggaaccaatacttcagctcctcaggatatctacgcggtcaatgga
atcgcgttccatcctgttcatggtacacttgccacggtgggatctgatggcagattcagc
ttttgggacaaagatgccagaacaaaacttaaaacttcagaacagttagatcaaccgata
tcggcttgctgcttcaatcacaatggaaacatatttgcatatgcttccagctacgactgg
tcaaagggacatgaattttataatccccaaaagaaaaattacattttcctgcgtaacgca
gccgaagagctaaagcccaggaacaagaagtag

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