Pteropus vampyrus (Indian flying fox): 120604901
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Entry
120604901 CDS
T07511
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03082
ATP-dependent chromatin remodeling
pgig04714
Thermogenesis
pgig05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120604901 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
120604901 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
120604901 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgig03021
]
120604901 (SMARCC2)
03036 Chromosome and associated proteins [BR:
pgig03036
]
120604901 (SMARCC2)
Transcription machinery [BR:
pgig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120604901 (SMARCC2)
Chromosome and associated proteins [BR:
pgig03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120604901 (SMARCC2)
PBAF complex
120604901 (SMARCC2)
GBAF(ncBAF) complex
120604901 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
120604901
NCBI-ProteinID:
XP_039721589
UniProt:
A0A6P3R1P2
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMENTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNIPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKEPREGVGAVEEEAKEKTSEAPKKDEEKGKEGDSEKE
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPAGAAGPPTVHGLAMA
PASVAPAPAGSGAPPGSLGPSDQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFGSLADSISINL
PPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQS
PAIVAAVQGNLLPSASPLPDSGTSLPPDPTAPSPGTVTPVPPPQ
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtacggctttggctcggcaagaactacaagaagtatattcaa
gctgaaccacccaccaacaaatccttgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcacctctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgacttccagaatccatcacgcatggaccgcaac
gtggaaatgttcatgaccattgagaagtccttggtgcagaataattgcctgtctcgacca
aacatttttctgtgcccagaaattgaacccaaactgctggggaaattaaaggacattatc
aagagacaccaaggaacggttactgaggataagaacaatgcctcccatgttgtctatcct
gtcccaggaaacctggaagaagaggaatgggtacgaccagtcatgaagagggataagcag
gttcttctgcactggggctactatcctgacagttacgacacatggatcccagccagtgaa
attgaagcatctgtggaagatgctccaactcctgagaaacctaggaaggttcatgcaaag
tggatcctagacacagacaccttcaatgaatggatgaatgaggaagactatgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacattgacagatgag
gtgaacagcccagattcagatcgacgggacaagaaaggggggaactataagaagaggaag
cgctccccttctccttcaccaaccccagaagctaagaagaaaaatgctaaaaaaggtccc
tcaacaccttataccaagtctaagcgtggccatagagaagaggagcaagaagacctgaca
aaggacatggatgagccctcaccggtccccaatgtcgaagaggtgacattgcccaaaaca
gtcaacactaaaaaggactcagaatcagccccagtcaaaggaggcaccatgactgacttg
gatgaacaggaggatgaaagcatggagaacacgggcaaggatgaggatgagaacagtacg
ggaaacaagggggagcagaccaagaatccggacctgcatgaggataacgtgactgaacag
acccaccacatcatcattcctagctacgcggcctggtttgactataatagtgttcatgcc
attgagcggagggctctccctgagttcttcaacggcaaaaacaagtccaagactccagaa
atctacctggcctatcgaaacttcatgattgacacttaccggctgaacccccaagagtac
ctcacctccaccgcctgccgcagaaacctagcgggtgatgtctgtgccatcatgagggtc
cacgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgacca
acaccaatggggcctccacccacttctcacttccatgtcttggcagacacaccctcaggg
ttggtgcctctgcagcccaagaccccacagggccgccaggttgatgctgataccaaggct
gggcggaagggcaaagagctggatgacctggtgccagagaccgctaagggcaagccagag
ctgcagacttctgcttcccaacaaatgctcaacttccctgacaaaggcaaagaaaaacca
acagacatgcagaactttggcctgcgcacagacatgtacacaaagaagaacatcccctcc
aagagcaaagctgcggccagtgctactcgagagtggacagaacaagagaccctgctgctc
ctggaggcactggaaatgtacaaagatgattggaacaaagtatcagagcatgtgggaagc
cgcacacaggacgagtgcatcttgcattttcttcgtcttcccattgaagacccatacctg
gaggactcagaggcctctctgggccccctggcctatcagcccatcccttttagtcagtca
ggcaaccctgttatgagcacagttgccttcctggcttctgtcgtcgatcctcgagtcgcc
tctgctgctgcgaagtcggctctagaagaattctccaaaatgaaggaagaggtacccaca
gccttggtggaggctcatgttcggaaagtggaagaagcagcaaaagtgacaggcaaggca
gacccagccttcggtctggaaagcagtggcattgctggaaccacctctgatgagcctgag
cgtattgaggagagcgggactgatgaggcgcgggcggaaggccaagccacagaggagaag
aaggagcccaaggaaccccgagaaggagttggggctgtagaggaggaagcaaaggagaag
accagcgaggctcccaaaaaggatgaagagaaagggaaagaaggtgacagcgagaaggag
tcagagaagagtgatggggaccctatagttgaccctgagaaggaaaaggagccaaaggag
gggcaggaggaagtgctgaaggaagtggtggagtcggagggggaaaggaagaccaaggtg
gagcgggacatcggtgaaggcaatctgtccactgctgctgccgctgccctggctgctgct
gccgtaaaggccaagcacttggctgccgttgaggagagaaagatcaaatctctggtggcc
ctgctggtggaaacccagatgaaaaagttagaaattaaacttcggcactttgaggaacta
gagacgatcatggaccgggagcgagaagcactggagtatcagaggcagcagctcctggcc
gacagacaagcctttcacatggagcagttgaagtatgcggagatgagagcccggcagcag
cacttccaacaaatgcaccaacagcagcagcagccaccaccagccctgcccccaggctcc
cagcctatcccacctgcaggtgctgctgggccacccacggtccacggcttagccatggct
ccagcctctgtggcccctgctcctgctggcagtggggcccctcctggaagcttgggcccc
tctgatcagattgggcaggcagggtcaactgcagggccacagcaacagcaaccagctgga
gccccccagcctggggctgtcccaccaggggtaccaccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcct
cctcctgctccatccatcatcccatttggtagtctagccgactccatcagtattaacctt
ccccctcctcctaacctgcatgggcatcaccaccatctcccgtttgccccgggcactctc
cccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgacc
accaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccagagc
cctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagac
tcaggcacctctctgcctccagatcccacagccccgagtccaggcacagtcacccctgtg
ccacctccacagtga
DBGET
integrated database retrieval system
