Pteropus vampyrus (Indian flying fox): 120604902
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Entry
120604902 CDS
T07511
Symbol
PAN2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120604902 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120604902 (PAN2)
Enzymes [BR:
pgig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
120604902 (PAN2)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120604902 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
120604902 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_CDC20-Fz
WD40_like
Beta-prop_THOC3
Motif
Other DBs
NCBI-GeneID:
120604902
NCBI-ProteinID:
XP_039721598
UniProt:
A0A6P3R1M3
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG
VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIR
QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLTDSSTLLVGGLQNHILE
IDLNTVQETQKYAVETPGVTIMRQSNRFFFCGHTSGKISLRDLRTFKVEHEFDAFSGSLS
DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL
AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS
PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP
RRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPIGREE
EPYLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADS
DEASGKGNLARLIQRWNRFILTQLHQDMQELEVPQAYRGAGGSSFCSSGDSVIGQLFSCE
MENCSLCRCGSETVRASSTLLFTLSYPEGSNSDKTGKNCDFAQVLKRSICLEQNTQAWCD
NCEKYQPTIQTRNIRHLPDILVINCEVNSLKEADFWRMQAEVAFKMAIKKHGGEISKNKE
FTLANWKELGSPEGMLMCPSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDVDEMQWGPAR
AEEEHGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEP
IDKHEAVQFDMNWKVPAILYYIKRNLNSKYNLNIKNPIEASVLLAEASLARKQRKTHTTF
IPLMLNEMPQVGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNE
GIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFV
GHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDA
RTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAAVFSSVL
AL
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgagggtctggaccctggactggcagaatatgccccggcaatgcattctgcc
ctggaccctgtcctggatgcccacctgaatccaagtctgctacagaatgtggagctggac
ccagagggagtggccttggaggctcttcctgtccaggaatcagtgcacattatggaaggt
gtctactctgaattgcacagtgtggtggctgaagtgggtgtgcctgtctccgtctcccac
tttgacttgcacgaggagatgctgtgggtgggaagccacgggggtcatgccacttcattt
tttggtccagccttggagcgctactcatcctttcaggtcaatggtagtgatgacattcgg
caaattcagagcctggagaatggtatcctttttctcaccaagaacaacctcaagtatatg
gcccgtggtggcctcattatatttgattacttgctggatgagaatgaggatatgcacagt
ctcctgctgactgacagcagcacactactcgttggtgggctgcagaaccacattttggag
attgaccttaatactgtccaggagactcagaagtatgcagtcgagacacctggagtcacc
atcatgagacagtcaaaccgcttcttcttctgtggccacacatctggcaaaatctccctg
cgagaccttcgtacttttaaggtggagcatgagttcgatgctttctcagggagtctgtca
gattttgatgtgcatggcaacctcttggccgcctgcggcttctccagccgcctcactggc
ctcgcgtgtgaccgtttcctcaaagtgtatgatctgcgcatgatgcgtgccatcacacca
cttcaagtacatgtggatcctgccttcttgcgcttcatccctacatatacttctcgtctt
gctatcatctcccagtcagggcaatgccagttttgtgagcccacaggcctggccaaccca
gcagacatctttcatgtgaatcctgtgggacctctgctgatgacgtttgatgtgtcagcc
agcaagcaggccctggcctttggggattctgagggctgcgtacacctctggactgactcc
cctgagccttccttcaacccctactcccgggaaaccgagtttgctttgccctgtcttgtg
gactcactgcctcctctggactggagccaggacctgctgcctctttctctcatccctgtc
ccactcaccactgacactcttctctccgattggcctgctgccaactctgctccagctccc
aggcgagcaccccctgtggatgcagagattctgcgcaccatgaagaaggtgggcttcatt
ggctatgcccctaatccccgtaccaggcttcgtaatcagattccttaccgactcaaggag
tcagacagtgaatttgacagcttcagccaggtcactgagtcaccaatagggcgggaagag
gagccatatctccacatggtctctaagaaatatcgcaaggtgaccatcaaatactccaag
ctagggctagaggactttgacttcaaacactacaataagaccctgtttgctggattagag
cctcacatccccaatgcctactgtaactgcatgatccaggtgctctatttcctggagcct
gttcgctgcctaatccagaaccacctttgccagaaggagttctgcctggcatgtgagctg
ggcttcctattccacatgttggacctctcccgaggtgacccttgtcagggcagtaatttt
cttcgggcattccgcactattcctgaagcctcagcccttggtctgatcctggctgactca
gacgaggcttcgggcaagggcaatctggccaggctcattcagaggtggaatcgcttcatt
ctcactcaactgcatcaggacatgcaggagctggaagtaccccaagcttatcgaggtgct
ggaggcagcagcttttgctcatcgggggactctgtcattgggcagctgttcagctgtgaa
atggagaactgcagcctctgccgctgtggcagtgagaccgtgcgagcctcatccaccctg
ctcttcacgctctcctaccctgagggtagcaacagtgataaaactgggaagaactgtgac
tttgctcaggtactaaagcgaagcatctgtctggagcagaatacacaggcctggtgtgac
aactgtgaaaagtaccagcccacgattcagacccgcaacatccgccatctgccagatatt
cttgtcatcaattgtgaagtgaatagcttgaaagaagctgacttctggagaatgcaggct
gaggttgccttcaagatggcaataaagaagcatggtggggaaatctccaagaacaaggag
tttactttggctaattggaaggaacttgggagtccagagggcatgctgatgtgtccttcc
attgaggagttaaagaatgtctggcttcctttctccattcgtatgaagatgaccaagaac
aaaggactagatgtttgcaattggactgatgtggatgagatgcagtggggcccagccagg
gcagaggaggagcatggtgtctatgtgtatgacctgatggctactgtggtacacatcctg
gactcacgcacagggggcagcctggtggctcacatcaaagttggagagacctaccaccaa
cggaaggagggtgttacccaccagcagtggtatctcttcaatgactttcttattgaacct
attgataagcatgaagctgtgcagtttgacatgaactggaaagtgcctgctatcctttat
tacatcaaaaggaatcttaattccaaatacaacctgaacatcaagaaccctattgaggca
agtgtcctgctagctgaagcctcacttgcacggaagcagcggaaaacacatactaccttt
attccactgatgctgaatgagatgccacaggttggggacctggtgggcttggatgctgag
tttgtcacccttaatgaggaggaagcagagttgcgcagtgatggcaccaagtctaccatc
aaaccaagccagatgtcagtagcaaggattacctgtgttcggggccagggacctaatgag
ggtatccccttcattgatgactacatctctacccaggagcaggtggtggattacttgact
cagtactcagggataaaaccaggagaccttgatgcgaagatttcctctaagcacctcaca
actctcaagtctacctacttaaaacttcgttttctcatagacatcggagtcaagtttgtg
ggtcatggtctgcagaaggacttccgggtcatcaatctcatggtgcccaaggaccaggtc
cttgacactgtctatctgtttcacatgcccagaaaacgaatgatttccctacgatttctt
gcttggtactttctggacctgaagattcaaggggagacccatgacagtattgaggatgcc
cgcacagcccttcagctctaccgaaagtatctagagctaagcaaaaatggcactgagcca
gagtccttccacaaagtgctcaagggtctttatgagaagggccgaaagatggactggaag
gtgcctgagcctgagggccagacaagtcccaagaatgcagctgttttctcctcagtgctg
gcgctctga
DBGET
integrated database retrieval system
