Pteropus vampyrus (Indian flying fox): 120605827
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Entry
120605827 CDS
T07511
Symbol
PRPF4
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120605827 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgig03041
]
120605827 (PRPF4)
Spliceosome [BR:
pgig03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120605827 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
120605827
NCBI-ProteinID:
XP_039722834
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MSTSRATSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLXNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctcacgagccacttccacggcaaccaaaactaaggcacctgatgacttagtc
gctcctgttgtgaagaaaccacacatttattatggaagtttggaagagaaggagagggag
cgtctggccaaaggagagtctgggattttgggaaaagaaggacttaaagcaggaattgaa
gcaggaaatattaacataacctctggagaagtgtttgaaattgaagagcacatcagtgaa
cgacaagctgaagtattagccgagtttgagagaaggaagcgagcccggcaaatcaatgtt
tccacagacgactcagaggtcaaagcttgccttagagccttgggggagcccatcacactt
tttggagagggtcctgctgaaagaagagaaaggttaagaaatatcctctcagtggttggt
actgatgccttaaaaaagaccaagaaagatgatgagaaatctaagaagtccaaagaagag
tatcagcaaacctggtaccatgaaggaccaaacagcctgaaggttgctagactatggatt
gctaattattcactgcccagggcaatgaaacgcttggaagaggcccgtctccacaaagag
attcctgagacaactaggacctcccagatgcaagagctgcacaaatctctccgtagtctt
tgaaatttctgcagtcagattggggatgatcggcctatctcctactgtcactttagtccc
aattccaaaatgctggccacagcttgttggagtgggctttgcaagctctggtctgttcct
gattgcaatctccttcacactcttcgaggccataacacaaatgtaggagcaattgtgttt
catccaaaatccactgtctccttggaccaaaaagatgttaatctggcttcttgtgctgct
gatggttctgtgaagctttggagccttgacagtgatgaaccagtggcagatatcgaaggc
cacacagtgcgtgtggcccgggtaatgtggcatccatcaggacgtttcttgggtaccacc
tgctatgaccgctcatggcgcttatgggacttggaggctcaagaagagatcctacatcag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
accgggggtctggatgcatttggtcgagtttgggacttgcgcacaggacgttgtatcatg
ttcctagaagggcacctgaaggaaatctatggaattaatttctcccccaatggctaccac
attgcaactggcagtggtgacaacacttgcaaagtgtgggaccttcgacagcggcgttgt
gtctataccatccctgcccatcagaacttagtgactggtgtcaagtttgagcctatccat
gggaatttcttgctcactggtgcctatgataacacagccaagatctggacccacccaggc
tggtccccactgaagactctggctggccatgaaggcaaagttatgggcctagacatttct
tccgatgggcagcttatagccacttgctcatatgacaggaccttcaagctatggatggct
gaatag
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