Pteropus vampyrus (Indian flying fox): 120606509
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Entry
120606509 CDS
T07511
Symbol
USHBP1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1 isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgig03037
]
120606509 (USHBP1)
Cilium and associated proteins [BR:
pgig03037
]
Primary cilia and associated proteins
USH complex and associated proteins
120606509 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
120606509
NCBI-ProteinID:
XP_039723691
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MSARATRPRSRRGRHIPPGELDPVAESLEEAEAANGSPALGPLPSQESCKTELLGPGVEE
SGQSLESRTEKEADEDSSRGLAPAPKEPHEPAEEAHQAPETAPWDRETVSSGSGAPDVFQ
TLQHALSSLEAAAAAWRHQPPSCSGPMEAEDRSKGRRRPCLEQEGAGGYQREASRMAERN
AWLRLALGSREDELIHMQASLEAIQTEKEMLQREVQELQDSLLRLDPFPPSSQSQAGGSG
SGSSSSGADGEPWATQDSFSLSHPLLQRLRSDSSGQILGSLSTQPLTPEMHIMEVQLEKL
QGSIEKLKCFNRLLSAVLQGYKGRCEGLSMQLGQREAEATALRLALQYSEHCEEAYGVLL
TLREADSGAEDIPKSDLEAAEKEAQRLLAQEEAAMDGGTRWDPQLSPEGSSVDRPTPQEV
STQLQGCVQRLRECRAMVKIPPDPGPTLSPMPTAPRAEAMVQAILGTQPGLALPQLEKMQ
IQQDLEAARETQEDLMLRLQLVRREKRGLELREAALRAQGPAHMLLLEQLRWEWAQLQTG
GANSSGGDSSGGRSSGDEEAWSQGPAIPGGIRGIDGGQVGKVQDREELAQELLASLTRTL
GLREQLQSLREELEQVAQKERARRAQSAELNSDLCKAHSALVLAFQGARQKQEGQRRKLE
QQVALMEARQAEELAVLETTARNLERPSQPRPPPQPGETFL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccgggccacacggccccgaagccggcgagggaggcacattccacctggggag
ctggaccctgtggcagaaagtttagaggaggctgaggcagccaacggaagccctgcactg
ggccctttgccatctcaggaaagctgcaagacagaactgctgggccctggggtggaggag
agtgggcagagcctggagagcagaaccgaaaaagaggctgatgaggactctagcagggga
ctggccccagcacccaaggagccccatgaacctgcagaagaagctcatcaggccccggag
acagccccatgggacagggagaccgtctcctctggatctggggcccctgacgtttttcag
actctccagcatgctctgagctcactggaggcagcagctgctgcctggcgccaccagccc
ccaagctgttctgggccaatggaggcagaggacagaagcaaggggagacgaaggccctgc
ctggagcaggaaggggcagggggctaccagagggaggcgtcccgcatggccgagagaaat
gcctggctgcgtttggccctgggaagccgtgaagatgaactaatccacatgcaggcctcc
ttggaggccatccagacggagaaggagatgctgcagagagaggtccaggagctgcaggat
tccctgctgaggctggaccccttcccaccttcctcccagagccaagcgggtggctcaggc
agtggatccagcagctccggggctgatggggagccctgggccactcaggactccttctcc
ctgtctcaccccctgctccagcgcctccggagtgattctagtggccagatccttggatct
ctctctacccagcctcttacgcccgagatgcacatcatggaagtccagttggagaagctc
caggggagcatcgagaagctcaaatgcttcaaccgtctgctgtcagctgtgctccaggga
tacaagggtcggtgtgagggcctcagcatgcagctgggccagcgggaggctgaggccacg
gcactacgtctggccttgcagtacagtgagcactgtgaggaggcatatggggtcctgctc
actctccgggaggcggactcaggagcagaagacatccccaagagtgacctggaggcagct
gagaaggaggctcagaggctgctggcccaagaggaggctgccatggatggagggacacgg
tgggatcctcagctaagccctgagggcagcagtgtggataggcctacaccacaggaggtg
tctacccagctccaaggctgtgtccagcgtctccgagagtgccgtgctatggtgaagatt
cccccagatcctggtcccaccttgtcacccatgcccactgcgccccgtgcagaagccatg
gtgcaggctattctggggacgcagcctggcctagccctgccccagctggagaagatgcag
atccagcaggacctggaggctgcacgggagacccaggaagacctgatgttgaggctacag
ttggtgcggcgggagaagcggggtctggagctgcgggaggctgccctccgagcccagggc
cccgcccacatgctcctgctggagcagcttcggtgggagtgggctcagctccaaactggt
ggggccaacagcagtggtggtgacagcagtggaggcaggagtagcggagacgaggaggca
tggtcccagggccctgctatccctggtggcatcaggggcatcgatggaggtcaggtgggc
aaagtgcaggatcgagaggagctagctcaggaactgttggcatcactcactcggaccctg
ggcctgcgggagcagctgcagtctctgcgggaggagctggaacaggtggctcagaaggag
cgagccagacgtgctcagagtgctgagctgaacagtgatttatgtaaggctcacagtgcc
ctggtactggccttccaaggagcccgccagaagcaggaagggcaacggaggaagctggaa
cagcaggtggcactaatggaggcacgacaggcagaagagctggctgtgctagaaaccact
gcaagaaacctggagaggcccagtcagccccgtccacctccccagccaggggagaccttt
ctgtag
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