Pteropus vampyrus (Indian flying fox): 120607073
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Entry
120607073 CDS
T07511
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig04622
RIG-I-like receptor signaling pathway
pgig05161
Hepatitis B
pgig05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
120607073
09172 Infectious disease: viral
05161 Hepatitis B
120607073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120607073
03041 Spliceosome [BR:
pgig03041
]
120607073
03036 Chromosome and associated proteins [BR:
pgig03036
]
120607073
Enzymes [BR:
pgig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120607073
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120607073
mRNA cycle factors
Common to processing body (P body) and stress granule
120607073
Spliceosome [BR:
pgig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120607073
Chromosome and associated proteins [BR:
pgig03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120607073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120607073
NCBI-ProteinID:
XP_039724610
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGASTANKGRYIPPHLRNREASKGFYDKGSSG
WSSSKDKDAYSSFGSRDSRGKSSYFSDRGSGSRGRFDDRGRSDYDGIGSRDRTGFGKFDR
SGHSRWCDRSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIES
FSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQ
IYADGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVY
GGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQI
RRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVW
VEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDRE
EALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLA
TSFFNERNVNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSRFSGGFGARDY
RQSSGSSSSSFSSSRSSSSRSGGGGHGSSRGFGGGGYGSFYNSDGYGGNYNSQGVDWWGN
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgcttggtctggaccagcagtttgctggtctagac
ctgaactcttctgataatcagagtggaggggcaagtacagcaaacaaagggcgttatata
cctcctcacttaaggaacagagaagcatctaaaggattctatgataaaggcagttcagga
tggagttctagtaaagataaggacgcatacagcagttttgggtctcgagattcaagagga
aagtccagttacttcagtgatcgtggcagcggatcaaggggaagatttgatgatcgtggt
cggagtgactacgatggtatcggcagtcgcgacaggactggctttggcaaatttgatagg
agtggacacagtcgttggtgtgatagatcagatgaagatgattggtcaaaaccacttcca
ccaagtgaacgcttggagcaggagctgttttctggaggaaacactgggattaactttgag
aaatatgatgatattccagtagaggcaaccggcaataactgtcctccacatattgaaagt
ttcagcgatgttgagatgggagaaattattatggggaatattgagcttactcgttatact
cgtcctactccagtacaaaaacatgccattcctattatcaaagaaaaaagagatttgatg
gcttgtgcccaaacagggtctggaaaaactgcagcatttcttttgcccatcttgagtcag
atttatgcagatggtccaggcgaggctttgaaagctgtgaaggaaaatggaaggtacgga
cgccgtaaacaatatccaatctctttggttttagccccaacaagagaattggctgtacag
atctatgaggaagccagaaaattttcgtaccggtctagagttcgtccttgtgtggtttat
ggtggtgctgatattggtcagcagattcgtgacctggaacgtggatgtcatttgttagtt
gccactccaggacgtctagtggatatgatggaaagaggaaagattggattagatttctgc
aagtacttagtattggatgaagctgataggatgctggatatggggtttgaacctcagatt
cgtcgtatagttgaacaagatactatgccaccaaaaggtgttcgccacacaatgatgttt
agtgctacttttcctaaggaaatacagatgcttgctcgtgatttcttggatgaatatatc
tttctggctgtaggcagggttggttccacctctgagaacatcacacaaaaagtagtttgg
gtggaagagtcagacaaacggtcatttcttcttgatctcttaaatgcaacagggaaagac
tcactgactttagtgtttgtggagaccaaaaagggtgctgattctctggaggatttctta
taccacgaaggctatgcttgtaccagcatccatggagaccgatcacagagagatagagag
gaagcccttcaccagttccgatcaggaaaaagcccaattctagtggctacagctgtggcg
gcaagaggactagacatttcaaatgtaaaacatgttatcaattttgatttgccaagtgat
attgaagaatacgtacaccggattggccgtacgggacgtgtaggaaaccttggccttgcg
acctcattctttaatgaaagaaatgtaaatatcacaaaagatttgttggatcttcttgtt
gaagctaaacaagaagtgccatcttggttagaaaatatggcttatgaacaccactataag
ggtagcagtcgtggacgttctaagagtagattcagtggaggatttggtgccagagactat
cgacaaagtagtggttccagcagttctagttttagtagtagtcgttcaagcagcagccgc
agtggtggaggtggtcatggcagcagccgaggatttggtggaggtggctatggaagcttc
tacaatagtgatggatatggaggaaattacaactcccagggggttgactggtggggcaac
tga
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