Pteropus vampyrus (Indian flying fox): 120607350
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Entry
120607350 CDS
T07511
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120607350 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120607350 (DCP1B)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120607350 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
120607350 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
120607350
NCBI-ProteinID:
XP_039725148
UniProt:
A0A6P3R0N5
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MAAVAACGLVGKGRDISLAALQHHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF
VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEEC
QRIAELMKNLTQYEQLKAHQGAGAGISPTILNSGEGKEVDILQMLTKAKDEYTKCKTCSE
PKQITSSSAIYNNPNLIKPIPVKPSENQQQHIPWPNQTLDPEPQHLSLMALFGKQDKATC
QETVGPPQTFHQHHQQQEKLPIRQGVVRSLSYEEPKRHSPPIEKQLCPAIQKLLIRSADL
HPLSELPENQPCKNGSTHSAREVFTGPAQPGSPQTIGASRRVHNASRTQNLLEKLHSAPG
AVKKHYPSTPAPASSAALSFSTTLTAATPAAPVKGVSQPQLVHVNGSLPPQALGHQAHGK
EQSTRPRQMLPISGNQTSGSGVISPQELLKKLQIVQQEQQLHASNRPALAAKFPVVTQSS
RTGKPLESWSDKTSSTEKQAPLLRVISSQRIPATVASSLLMSPMVFTQPTCTSPKERDSG
LLPLGSQDPAATSTSLLLPLQSPEPNVLTSSPLTKLQLQEALLFLIQNDDNFLNIIYEAY
LFSMTQAAMKKTM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtagcggcgtgcggcctggtggggaagggacgcgacatcagcctggctgcc
ctgcagcaccacgacccctatatcaaccgcatcgtagacgtggccagccaagtcgctctg
tacactttcggccatcgggccaatgagtgggagaaaactgatgtggaaggaaccttattt
gtttacacaaggtctgcttctccaaaacatgggttcaccattatgaataggctgagcatg
gaaaataggacagaacccattactaaagacctggatttccagctccaggaccctttcctt
ctctacagaaatgccagattgtccatttatggaatttggttttatgataaggaagaatgc
caaagaattgcagagcttatgaaaaacttaactcaatatgaacagttgaaagcccatcag
ggagctggagcaggaatctccccaacgatcctcaattcgggagaaggcaaggaagtagat
atcttacaaatgctcaccaaggccaaagatgaatacacaaagtgtaaaacttgttctgag
ccaaaacagataaccagttcatctgccatctacaacaaccccaatctcatcaaaccaatt
ccagtgaagcccagtgaaaaccagcaacagcatataccttggcccaaccagaccttagac
cccgaaccccaacacttgtccttgatggcactctttgggaagcaggacaaagctacatgt
caggaaactgtggggcctccacagaccttccaccagcaccaccagcagcaagagaagctt
ccaattaggcagggggttgtgcgttccctgtcctatgaggaacccaaaagacactcgccc
cccatcgagaagcagctctgtccagccattcagaaactcctgatcaggagtgcagacctc
cacccattgtcagagcttcctgaaaaccagccctgcaaaaatggcagtacccattctgct
agggaagtttttactggacctgcccagccagggtctccccagaccattggggcctctcgt
cgtgtacacaatgcttccagaactcagaacctgttagagaagcttcacagtgccccaggg
gcagtgaagaagcactaccctagtacaccagcacctgccagctcagctgccctaagcttc
agcacaactcttactgctgccacccctgcagctccagtaaagggagtgtctcagccacaa
ctggtacatgtcaatggctcccttccacctcaggcactaggacatcaggctcatggaaaa
gaacagtctacgcgtccaagacaaatgctccctatctctggcaatcagacaagtggttct
ggagtgatctcccctcaagagctactaaagaagcttcagatcgtgcagcaggagcagcag
ctgcatgcatctaaccgaccagccttggcagctaagtttcctgtggtaactcagagctct
agaacaggaaaacccttggaatcttggagcgacaagacatccagcacagaaaagcaggct
cctcttctccgggtcatctcatcgcagcgtatccctgctacagtggcctcttctctgctc
atgtcccccatggtgttcacacaacccacctgtacctcaccaaaggagcgggacagtggg
ctcttgcccttgggaagccaggatccagctgccacctccaccagcctcctcctgcctctg
cagagcccggagcccaatgtactcaccagcagcccacttaccaagttgcaacttcaagaa
gcactgctgttcctcattcagaatgacgacaacttcttaaatataatctatgaggcttat
ctcttcagcatgacacaagcagccatgaaaaagactatgtga
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