KEGG   Pteropus vampyrus (Indian flying fox): 120608206
Entry
120608206         CDS       T07511                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
pgig  Pteropus vampyrus (Indian flying fox)
Pathway
pgig03420  Nucleotide excision repair
pgig04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pgig00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120608206 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120608206 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pgig04121]
    120608206 (ERCC8)
   03400 DNA repair and recombination proteins [BR:pgig03400]
    120608206 (ERCC8)
Ubiquitin system [BR:pgig04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     120608206 (ERCC8)
DNA repair and recombination proteins [BR:pgig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      120608206 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WDR55 WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_1st Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_WDR11_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 120608206
NCBI-ProteinID: XP_039725922
LinkDB
Position
Unknown
AA seq 396 aa
MLGFLSARQAGLDDPLRLRRAESTRRVLGLELNKDRDVERIHGNGVNTLDIEPVQGRYML
SGGSDGVIVLYDLENSSRQPYYTCKAVCSVDRNHPDVHKYSVETVQWYPYDTGMFTSSSF
DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRHEYILATASADSRVKLWDVRRASGCLITLDQHNGEKSQAVESA
NTAHNGKVNGLCFTNDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNDSRKGLKFTVS
CGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHFKSVDCCVFQSDFQELYSGSRDCNILA
WVPSLYEPVPDDDEITTKSQLNPAFEDAWSSSDEEG
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgctgggttttttgtccgcgcggcaagcaggattggacgaccctcttcgcctacgaaga
gcggagtccacacgaagggttttaggactagaattaaacaaagacagagatgttgaaagg
atccatggcaatggagttaacacccttgacattgaacctgttcaagggagatacatgtta
tcaggtggttcagatggtgtgattgtactttatgatcttgagaactccagcagacaacct
tattacacatgtaaagcagtgtgttctgttgacagaaaccatcctgatgttcacaaatat
agtgtggagactgtacagtggtatccttatgacactggcatgttcacatcaagctcattt
gataaaacgctgaaagtatgggatacaaatacattacaaactgcagatgtatttaatttc
gaagaaaccgtttatagtcatcatatgtctccagtcgccactaagcactgtttggtagca
gttggtactagagggcccaaagtacaactttgtgacttaaagtctggatcctgttcccac
attctacagggtcacagacaagaaattttggcagtttcttggtcaccacgtcatgaatat
atcttggcaactgcaagtgctgacagtagagtaaaattatgggatgtaaggagagcgtca
ggatgtttgattactcttgatcagcataatggggaaaagtcacaagctgttgaatcagca
aatactgctcataatgggaaagttaatggcttatgttttacaaatgatggacttcaccta
ctcactgttggtacagataatcgaatgagactctggaatagttccaatggagaaaacaca
ctggtgaattatggaaaagtttgtaatgacagtagaaaaggattgaaattcactgtctcc
tgtggctgcagttcagaatttgtttttgtaccatatggtagcaccattgctgtttataca
atttactcaggagaacagataactatgcttaagggacattttaaaagtgttgactgctgt
gtatttcagtctgatttccaggaactttatagtggtagcagagattgcaatattcttgct
tgggtaccatccttatatgaaccagttcctgatgatgatgagattacaaccaaatcacag
ttaaatccagcatttgaagatgcctggagcagcagtgatgaggaaggatga

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