Pteropus vampyrus (Indian flying fox): 120608751
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Entry
120608751 CDS
T07511
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgig03036
]
120608751 (SHOC1)
Chromosome and associated proteins [BR:
pgig03036
]
Eukaryotic type
Meiosis-specific proteins
Others
120608751 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
120608751
NCBI-ProteinID:
XP_039726638
LinkDB
All DBs
Position
Unknown
AA seq
1520 aa
AA seq
DB search
MKWKILKLVLSKKEDMFSTFKYCAIDYLYENVVRKKSRGDSLFLRIPSCLYQDGNYQAGI
VDDTFRRPWTRVSAVPMRGMNDSSILDQWKASFFVEEFLEKKTVTGMATQINYEFEEVVP
SSNPNSQNEFEEATLHTPKDYSEVFTPISCLEKWPLLQATNQELFIDEEIIFTCKSQLPT
LHALVNRLKLYLVKDPLSDFKEQVFTEAIFLSERFPFQGDFKSLAKEDFYMDKEKFYKEK
LEDTADLNDILFLVRYEFLIPTGLKQVDIPSLSELKELLNITPEIINYEDENEKLFKRDL
TTKHGIDIEDIKCSPTEILAIQSKYEPEHSKLEHSEPEELEMPLTCLHLKNEYSSVNSLR
TGLQTFPFSPISKINLLTDEESANSYSMMWQLESCRSFLNPFLLPVPRTEEPNSQYSVTD
LKKILSIEEESLVITPVSPEWWKQAGLNLIETDTLEHLTTYHDLSSDDTKMEIFLPTKVL
QLESWLDHTSISSPIELINEESISDNLSLPQKSPSPIKEVPDLCFSDEYISLRSPKQQEK
TKIDQELVYRIIQNEENNDYLQLDCTVLSTESSPSSKIGKASYKHGKKRESNLDLLNDFM
MLRNKQTCTSKTEVTDIDEKDDEEEHSSTLPEESPIVCTNKTLEKINQEKRIDNVIEIQA
SDSQCKAYCILEAAATPILKKLACFCTLPVANWKFATVVFDQTRFLLKEQEKVISDALHQ
DTNDERETTFKHAALLHLLVSIRDVLLTCSLDTALGYLSNAKDVYKSILGSYLDDIWRQL
EIVQFIRKKKPETNYKIQELQCQILNWMQSKQQIKVLIIIRMDSDDEKHLLIEILSKMEG
LTLTVLHSNKRKDFLESEGVLNGNSSCVVVPNEYIGADFSWSNFSFVVEYNYVENSCWTK
HCEKLNIPYMAFKVILPDTVLNRSTSLDSFGGFLLEIQIPYVFFASEGLLNTPQILQLLE
SKYNITLVERCCSESLKLFGGTEYYVLMTIDEHTAIILQDLKELNCEKSSDNIIMRLMAL
SFQYSYCWIILYTKNTLNSEYHLTEKTLYHLALIYAALVSFGLKSEELDVKLIMSPGVEE
TALIIRQIADHNLMTSKRDPHEWLDKSWLEVSPSKEETYLLDFPCINPLVAQLMLNKGPS
LHWILLATLHELQELLPEVPEKVLKHFCGTTSLFKINSSSITKSPQISSPRENRNQISNF
TSQSSASDSSESVIQENNEYYLYSDLRETVQEDTNTTSNYNSSLMELREMPSISPPMTSY
SQTRYWRDSSCNPNKVQNNPFLVNTESRNSAGNSFLNQNDSQSDVFSLGLTQMNCETRIS
STDTQKRIAPNFINDQKKGTYEARRPINKEISAPIFSLEGSQSPLHWNFKKNVWEQQKHP
FNLQYGAQQTTCDKWYSQKDNLFTNQQKCLSDESEGFMCESSNAGTKKSFWKELPSVPSL
DFFRASDSNVNQKEYNSLCFYQRTGKCLGQKRHSESSSTSGDKKSLTDFMCSQLPQCKKR
RLVYEKVPGRVDGQTRLKFF
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggaagattttgaaattagtactttcaaaaaaagaagatatgttttcaacattc
aaatattgcgcaatagactatttatatgagaatgtagttagaaagaagtctcgcggagat
tctttatttcttcgaatcccttcatgtttatatcaagatggaaattatcaagcaggaatt
gttgatgatacatttaggaggccatggacgagagtctcagctgttccaatgcggggaatg
aatgatagctcaatcttggaccaatggaaagcaagtttctttgtggaggagttccttgag
aaaaaaacagttacaggaatggcgactcagattaactatgaatttgaggaagttgttcca
agttcaaatccaaattcccaaaatgaattcgaggaagccacgttacacactcctaaggac
tacagtgaagtttttacgcccatcagttgtttagaaaaatggccattacttcaagcaaca
aaccaagaattgtttattgatgaagaaatcatttttacctgtaaaagtcagctaccaact
ttacatgctctagtgaataggctaaaactgtatttggtaaaggaccccctttcagatttt
aaagagcaagtcttcacagaagctatttttttgagtgaacgcttcccttttcaaggagat
ttcaaaagtcttgcgaaagaagatttttacatggataaagagaaattttataaagagaag
ctagaagatacagcagatttaaatgacatattgtttttggtaagatatgaattcttaata
cctacaggcctcaaacaagttgatattccatcactttcagaactgaaggaattattaaac
ataacgccagaaataataaattatgaagatgaaaatgaaaagcttttcaaaagagatctt
actaccaagcatggaatagacattgaggatataaaatgcagccccacagagattttggcc
attcaaagcaaatatgaaccagaacatagtaaactagagcacagtgaaccagaagagtta
gaaatgccattaacttgcctacacctaaaaaatgaatattcttctgtgaactcattacgt
acaggacttcagacatttccattttctcctatctctaaaattaatttgcttactgatgaa
gaatcagctaacagttactctatgatgtggcaattagaaagctgtagaagctttttgaac
ccatttttacttccagtgccaagaactgaagagcccaatagtcaatattcagttacagat
ttgaaaaagatactttctattgaagaagaaagccttgtcattactcccgtaagcccagag
tggtggaaacaagcaggactaaatctgatagagacagacaccttggaacatctgactaca
tatcatgatctgtcttctgatgatactaaaatggagatatttttgcctacaaaagtgttg
caattagaatcatggctagaccatacaagtatttcctcacctattgaacttattaatgag
gaatctataagtgataatttatcacttccacaaaaaagtccatctccaataaaagaagtg
ccagacctgtgtttttctgatgaatatatctctcttagaagtccaaaacaacaagaaaaa
acaaaaattgatcaagaactagtttacagaataatacaaaatgaagaaaataacgattac
ttgcaacttgattgtacagtactatctactgaatcatctccctcttcaaaaattggaaaa
gcgtcttataaacatggtaaaaaacgggagagtaatttagaccttttgaatgactttatg
atgctgcgaaataaacaaacttgcacctcaaagactgaagtcacagacattgatgagaaa
gatgatgaagaagaacattcttcaactcttccagaagaaagtcctattgtttgtactaat
aaaactctagagaaaataaatcaagaaaagagaatagataatgtcattgaaattcaagca
tcagatagccagtgcaaagcatactgtatcctagaagcagcagctactcctatcttaaaa
aagcttgcatgcttctgtactcttcctgttgctaattggaaatttgccactgttgttttt
gaccaaacaaggtttctcttaaaggaacaagaaaaagtaataagtgatgctcttcaccaa
gatacaaatgatgaaagagaaacgacgttcaagcatgctgctctcttacaccttctggta
tcaattagagatgtccttttaacatgtagcttggacacagcattgggatatttgtcaaat
gcaaaagatgtctacaaaagtattttaggctcttatttggatgatatttggaggcagtta
gaaattgtacagttcattaggaaaaaaaagcctgaaaccaactacaagatacaagaatta
caatgtcagatactaaattggatgcaaagtaaacagcaaattaaggtgctgatcataata
agaatggactctgatgatgaaaaacatttactcattgaaatccttagcaaaatggaaggt
ttaacattgactgtcttacattcaaacaaaagaaaagattttctggaatctgaaggtgtt
ttaaacggtaacagttcctgtgtagtcgtacctaatgaatacattggagcagatttctcc
tggagtaatttctcatttgtcgtggaatacaattatgtagaaaactcttgttggactaaa
cactgtgaaaagttgaatattccatacatggcttttaaagtgattcttccagatacagtt
ttaaatagaagcacttcgctggatagttttggtggttttcttttggaaattcagattcca
tatgtgttttttgcatctgaaggacttcttaatactccacaaattcttcagttgctagaa
tccaaatataatatcacactagtggagagatgctgtagtgagtcattgaaactctttggt
ggtacagagtattatgtactgatgacgattgatgaacacactgccataattttgcaggac
ctaaaagaattgaattgtgagaagtcatcagacaatatcattatgagactgatggcatta
tcattccagtacagctattgttggataattttgtataccaaaaatacattaaactcggag
taccatcttacggaaaagacactttatcacttagcattgatttatgcagctttggtttca
tttgggctaaaatcagaagaactggatgtaaagctcataatgtctccaggagtggaagaa
actgcactgataattcgacaaattgctgaccacaatttaatgacctcaaagagagatcct
catgaatggttggataaatcctggcttgaagtttcaccatctaaggaagaaacatactta
cttgattttccatgtattaacccattggtggctcagctcatgttaaataaaggaccttca
ctacattggatattactagcgactcttcatgaacttcaggaactcctacctgaagttcca
gaaaaagtgttaaagcatttttgtggcactacttccttattcaagattaattcttcttcc
ataacaaaatcacctcaaatttcatctcctcgggaaaataggaatcagattagtaacttt
acttctcagagttcagcttctgactcttcagagtctgttattcaagaaaataatgaatat
tacctgtattcagacttaagagagacagtgcaggaagacacaaacaccacttcaaattat
aattcttcccttatggaactaagagaaatgccaagtatttcaccacctatgacttcttac
agtcagaccagatactggagagactccagttgtaaccctaacaaagtacagaataatcct
tttctggttaatacagaatcaaggaactcggccggtaactcctttctaaaccagaatgat
tcacagtcagatgtcttttctttgggtctaacacaaatgaattgtgaaaccagaatatca
tcaactgacactcagaagcgtattgcccctaattttataaatgatcagaaaaagggaaca
tatgaagcaagaagacctataaataaagagatatctgcccctatcttctcactagaaggc
tctcaatcgcctcttcattggaactttaagaaaaatgtatgggaacaacagaaacaccca
ttcaacttacagtatggtgcccagcagactacatgtgacaaatggtactctcagaaagat
aatttgttcactaatcagcaaaaatgtctatccgatgagtcagaaggcttcatgtgtgaa
agttcaaatgctggaactaaaaagagtttctggaaagaattaccatctgttcccagtttg
gatttctttcgtgcctctgattctaatgtaaatcaaaaagaatacaacagtctttgtttc
taccaaagaactggaaaatgtttaggacagaaaaggcactctgaatcttcatcaacctca
ggagacaagaaatcattaacagatttcatgtgctcacaactaccgcaatgcaaaaaacga
cgtcttgtgtatgaaaaagtccctgggagagttgatggacaaactcgtctgaagtttttt
tga
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integrated database retrieval system
