Pteropus vampyrus (Indian flying fox): 120609060
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Entry
120609060 CDS
T07511
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgig03016
]
120609060 (TRUB1)
Enzymes [BR:
pgig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
120609060 (TRUB1)
Transfer RNA biogenesis [BR:
pgig03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120609060 (TRUB1)
Prokaryotic type
120609060 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
120609060
NCBI-ProteinID:
XP_039727063
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MAAAEAAVLSSSLETDTAAVPETAGTAAATAATPPVSAAAAAVAAAARTRSEARGSKAAL
ATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTLD
SAARGVLVVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQED
IEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEAVEAKPARPVTVYSLSLQKFQPP
FFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDIA
QSLEHCSSLLPAELALKKSKPEESNEQVLSCEYITLDETKGEDAIIKTC
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcggtgctgtcgtcatctttagaaacagacacagccgcagtc
cctgaaaccgcaggaacagctgcagccacggctgccaccccgccagtatcggctgcagcc
gcggcggtcgcggcggccgcacggaccagatccgaagccaggggctccaaggccgctctg
gctactaagctcctgtccctgagcggcgtgttcgcagtgcacaagcccaaagggcccact
tcagccgagctgctgaatcggctgaaggagaagctgctggcagaagctggaatgccttct
ccagaatggaccaagcggaaaaagcagactttgaaaattgggcatggagggactctagac
agcgcagcccgaggagttctggtggttggaattggaaggggaacaaaaatgttgaccagt
atgttgtcagggtccaagaggtatattgccatcggagaactggggaaagctactgacacg
ctagattctacagggaaagtaacagaagaaaaaccttatgataaaataactcaagaagat
attgaaggcattttacagaaatttactgggaatataatgcaggtacctcccctctattct
gcattaaagaaggatggacagagactttcgactttgatgaagagaggtgaagcagtagaa
gcaaaacctgccaggccagttaccgtatacagtctctcccttcaaaaattccagccacca
tttttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagtgac
attggcaaagaactctcttcctgtgccaatgtactagagctgacccgaaccaaacaagga
ccattcacactagaagagcatgcccttcctgaagacaaatggacaattgatgacattgca
cagtctcttgagcattgctcatctcttctccccgcggagttggcacttaaaaaatcgaaa
cctgaagagtcgaatgaacaagttttgagttgtgaatatataactctagacgagacaaag
ggagaagatgctataattaagacatgttaa
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