Pteropus vampyrus (Indian flying fox): 120609457
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Entry
120609457 CDS
T07511
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgig03009
]
120609457 (DDX21)
03036 Chromosome and associated proteins [BR:
pgig03036
]
120609457 (DDX21)
Enzymes [BR:
pgig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120609457 (DDX21)
Ribosome biogenesis [BR:
pgig03009
]
Eukaryotic type
Pre-60S particles
Helicases
120609457 (DDX21)
Chromosome and associated proteins [BR:
pgig03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
120609457 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
120609457
NCBI-ProteinID:
XP_039727908
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MMPGKLLSDVNLESDTAMGKVEIPRKEKKVKKEKPKSGKTEEAAEEKQEVVSPKAKKVKK
KAEPSEVDVNSPTSKKSKKKEETSQNDIISPKTKSVKKPKEPIEKKVVSPKTKKAVKNEE
PSEEEIGAPKPKKMKKEKEMNGEIGEKSPKLKNGFSHSGPDSNSNEIASEESNSELEQEI
PVEQKEGAFSNFPISEGTIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFS
FAIPLIEKLLGELQDRKRGRAPQVLVLAPTRELANQVSKDFSDITKKLAVACFYGGTPYG
GQIERMRNGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSV
AYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCH
WTQRAAVIGDVIRVYSGFHGRTIIFCETKKEAQELSQNVSIKQDAQSLHGDIPQKQREIT
LKGFRNGDFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGICIC
FYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAE
KLIEEKGAVEALAAALAHISGATSVDQRSLINSDAGFVTMILQCSIEMPNISYAWKELKE
QLGEDIDSKVKGMVFLKGKQGVCFDVPTAAVTEIQEKWHDSRRWQLSVATEQPELEGPRE
GYRSYRGQREGNRGFRGQREGNRGFRGQREGNRNFRGQRSGGGRSNRFQNNKGQKRSFSK
AFGQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggggaaactcctcagtgacgtgaatttggaatcagacaccgccatgggaaaa
gtggagataccgcgaaaagagaagaaagttaaaaaagagaagccaaaatctggtaagact
gaagaggcagcagaagaaaagcaagaagttgtttcccccaaagctaaaaaagttaaaaag
aaagcagaaccttctgaagttgatgtgaattctcctacatccaaaaagtcaaaaaagaaa
gaggagacatctcaaaatgacattatttctcctaaaaccaaaagtgtaaaaaaaccaaag
gagcccattgaaaagaaagttgtttctcctaaaaccaaaaaagcagtaaaaaatgaggag
ccttctgaagaagaaataggtgctcctaaacccaaaaagatgaagaaagaaaaggaaatg
aatggagaaattggagagaagagccccaaactgaagaatggattctctcattctggacct
gactctaactccaacgaaattgccagtgaagaaagtaacagtgagttagagcaggaaata
cctgtggaacaaaaagaaggcgctttctccaatttccccatatctgaagggactattaaa
cttctcaaagcccgtggggtgaccttcctgtttcctatacaagcaaagacatttcaccat
gtctatagtggaaaagatttaattgcacaggcacggacaggaactgggaagactttctcc
tttgccatccctttgattgagaaacttctgggagaactgcaagaccgaaagagaggccgt
gcccctcaggtactggttcttgcacctacaagggagttagcaaatcaagtaagcaaagat
ttcagcgacatcacaaaaaaattggcagtggcttgtttttatggtggaactccctatgga
ggtcaaatcgaacgcatgcggaatgggattgacatcttggttgggacaccaggccgtatc
aaagaccatctgcagaatggcaagctggatctcaccaaacttaaacatgttgtcctggat
gaagttgaccagatgttggatatggggtttgctgatcaagtggaagagattttaagtgtg
gcatacaagaaagattcagaagataatccccaaacattgcttttttctgcaacttgtcct
cattgggtttttaatgttgctaagaagtacatgaagtctacatatgaacaggtggactta
attggtaaaaagactcagaaaacagcaataactgtggagcatctggctatcaagtgccac
tggactcaaagagcagcagttattggggatgtgatccgagtgtatagtggttttcatggg
cgcactatcatcttctgtgaaacaaagaaagaagcccaggagctgtcacagaatgtgtcc
ataaagcaggatgcccagtcattacacggagatattccacagaagcaaagggaaatcaca
ctgaaaggttttagaaatggtgattttggagtattggttgcaaccaatgttgctgcacgt
gggttagacatccctgaggttgatctggttatacagagttctccaccaaaggatgtggag
tcctacattcatcgttctgggcgaacgggtagagctggaaggacagggatttgcatctgc
ttttatcagcacaaggaagaatatcagttagcacaagtggagcaaaaagcgggaattaaa
tttaaacgaataggtgttccttctgcaacagaaataataaaagcttccagcaaagatgcc
atcaggcttttggattctgtgcctcccactgccattagtcactttaagcagtcagctgag
aagctgatagaggagaagggcgctgtggaagccctggcagcagcgctggcccacatttca
ggtgccacatcagtagaccagcgctctttgatcaactcagatgcgggctttgtgaccatg
atcttacagtgctcaattgaaatgccaaacattagttatgcttggaaagaacttaaagag
caactgggtgaggatattgattccaaagtgaagggaatggtctttctcaaaggaaagcag
ggtgtttgttttgatgtccctactgcagcagtaacagaaatacaggaaaaatggcatgat
tcacggcgctggcagctctctgtggccacagagcagccagagctagaaggaccacgggaa
ggataccgaagctacagaggacagcgggaaggcaatcgaggctttaggggacagcgagaa
ggaaacagaggtttcaggggacagcgggaaggaaatagaaacttcagaggacagcgatca
ggaggtggcagaagtaacagatttcaaaacaacaaaggccagaaacggagttttagtaaa
gcatttggtcagtaa
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