Pteropus vampyrus (Indian flying fox): 120610374
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Entry
120610374 CDS
T07511
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgig03041
]
120610374 (DDX18)
03009 Ribosome biogenesis [BR:
pgig03009
]
120610374 (DDX18)
Enzymes [BR:
pgig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120610374 (DDX18)
Spliceosome [BR:
pgig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120610374 (DDX18)
Ribosome biogenesis [BR:
pgig03009
]
Eukaryotic type
90S particles
Helicases
120610374 (DDX18)
Pre-60S particles
120610374 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
KARI_C
Motif
Other DBs
NCBI-GeneID:
120610374
NCBI-ProteinID:
XP_039728631
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQGASDVSLSETQNGDVSEETVGGGKVKKSLKQS
MNKGLSEVQNGDISKETVENIKVKKSKKSTILTNGEAATQPPNSESKKKKKKKRKIVDDA
GPDTKKAKTEDKEKSEDSVQTPEETANSAEKPDDEEGDSEVPSLPLGLTGAFEDTSFASL
SNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIV
KLKFMPRNGTGILILSPTRELAMQTFGVLKELMTHHVHTYGLVMGGSNRSAEAQKLANGI
NIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTML
FSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKK
NRKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADTGILLCT
DVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLK
QSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFDVN
NLNLPQVALSFGFKVPPFVDLNVNSNEGKLKKRGGGGGFGYQKTKKVEKSKIFKHISKKS
SDRRQFSH
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatctaccgatgaaactcctgcggaagaagatcgagaagcggaacctcaaattg
cggcaacgaaacctaaagctacagggggcctcagatgtgagcctatcagaaactcaaaat
ggagatgtgtctgaagaaacagtgggaggtggaaaagttaaaaaatccttaaagcagtct
atgaataagggcttgtcagaagtccaaaatggggatatatctaaagaaacagtggaaaat
ataaaggttaaaaaatccaagaagtctaccatattaaccaatggggaagcagcaacacag
cctcccaattcagaatcgaagaagaaaaagaagaaaaagagaaaaatagtagatgatgct
gggcctgataccaaaaaagcaaaaactgaagacaaagagaaatctgaagacagtgtccag
actcctgaagaaacagcaaacagtgcggaaaagccagatgatgaagaaggggacagtgag
gtgcccagcctgcccctgggactgacaggagcttttgaggatacctcatttgcttctcta
tctaatcttgtcaatgagaacactctgaaggcaataaaagaaatgggctttacaaacatg
actgaaattcagcataaaagtatcagaccacttctggaaggcagggatcttctagcagct
gcaaaaacaggcagtggcaaaaccctggcatttctcatccctgcagttgaactcattgtt
aagttaaagtttatgcccaggaatggaacaggaattcttattctctcacctactagggaa
ctggccatgcagactttcggtgttcttaaagagctaatgacacatcatgttcatacatat
gggttagtaatgggtggcagtaacagatctgctgaagcacagaaacttgctaatgggatc
aatatcattgtggctacaccaggccgtctgctggaccatatgcaaaatactccagggttt
atgtataaaaacctacagtgtctggttattgatgaggctgatcgtattttggatgttgga
tttgaagaggagttaaagcaaattattaaacttctgccaacacgcagacagaccatgctc
ttttctgccacacaaactcgaaaagttgaagacctggcaaggatttctctgaaaaaggag
ccattgtatgttggtgttgatgatgataaagctaatgcaacagttgacggtcttgaacag
ggatatgttgtttgtccttctgaaaagagattcctcctgctctttacgttccttaagaag
aaccggaagaagaaactaatggtcttcttttcatcctgtaagtctgtgaaataccactac
gagttgctgaattacatcgatttgcctgtcttggccattcatggaaggcagaagcaaaat
aagcgtacaaccacattcttccagttctgcaatgctgatacggggatattgttgtgcaca
gacgtggcagctagagggctggacattcctgaagttgactggattgttcagtatgaccct
ccagatgaccccaaggaatatattcatcgtgtgggtagaacagccagaggcctaaacgga
agagggcatgccttgctcattttgcgccctgaagaattgggtttccttcgatacttgaag
caatctaaggttccattaagtgaatttgagttttcctggtccaaaatttctgacattcag
tctcagcttgaaaaattgattgaaaagaactactttcttcataagtcagctcaggaagca
tataagtcatacattcgagcatatgattcccattctctgaaacagatctttgatgttaat
aacttaaatttgcctcaggtggctctgtcatttggtttcaaggtgcctccttttgttgat
ctgaatgtgaacagtaacgaaggcaagcttaaaaagagaggaggaggtggtggattcggc
taccagaaaaccaagaaggtcgagaagtccaaaatcttcaaacacattagcaagaagtca
tctgacaggaggcagttctctcactga
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integrated database retrieval system
