Pteropus vampyrus (Indian flying fox): 120610841
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Entry
120610841 CDS
T07511
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03082
ATP-dependent chromatin remodeling
pgig04714
Thermogenesis
pgig05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120610841 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
120610841 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
120610841 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgig03021
]
120610841 (SMARCA4)
03036 Chromosome and associated proteins [BR:
pgig03036
]
120610841 (SMARCA4)
Transcription machinery [BR:
pgig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120610841 (SMARCA4)
Chromosome and associated proteins [BR:
pgig03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120610841 (SMARCA4)
Chromatin remodeling factors
BAF complex
120610841 (SMARCA4)
PBAF complex
120610841 (SMARCA4)
GBAF(ncBAF) complex
120610841 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Htt_C-HEAT
DUF2009
Motif
Other DBs
NCBI-GeneID:
120610841
NCBI-ProteinID:
XP_039729088
LinkDB
All DBs
Position
Unknown
AA seq
1650 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPSQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHTGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPASGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQVPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPSQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDES
KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEY
YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF
TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPS
RGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacctctgggtggaactcctcggccaggcccttctccaggccct
ggcccatctcctggagccatgttgggccctagcccgggtccctcccccggctctgcccac
agcatgatggggcccagcccggggcctccctcagcaggacaccccatcccaagccagggg
cctggagggtaccctcaggacaacatgcaccagatgcacaagccaatggagtccatgcat
gagaaaggcatgtcggatgacccccgctacaaccagatgaagggaatggggatgcggtca
gggggccacacaggcatggggcccccgccaagccccatggaccagcactcccaaggttac
ccctcacccctgggtggctccgagcacgcttctagtccggttccagctagtggcccagcc
tcaggccctcagatgtcatccgggccaggaggagccccactggatggtgctgaccctcag
gctttggggcagcagaaccggggcccaactccatttaaccagaaccagctgcaccagctc
agagctcagatcatggcctacaagatgctggccaggggacagcccctgcctgaccacctg
cagatggcagtgcagggcaagcggccgatgcctgggatgcagcagcaggtgccaacacta
cctccaccctctgtgtctgcaacaggacctggccccggccccggccccggccctgggcca
ggcccaggaccagcgcctccaaattacagcaggcctcatggcatgggagggcccaacatg
ccccccccaggaccctcaggtgtgccccctgggatgccaggccagccccccggagggcct
cctaagccctggcctgaaggacctatggcgaatgctgctgcccccacgagcacacctcag
aagctgatcccccctcagcctacgggccgcccctcacctgcgcccccagccgtcccgcct
gctgcctcccctgtgatgccaccgcagacgcagtcaccagggcagccagcccagcctgcc
cccatggtgccgctgcaccagaagcagagccgcatcacccccatccagaagccgcggggc
ctggaccctgttgagattctgcaggagcgggagtacaggctgcaagctcgcattgctcat
cgaattcaggaacttgaaaaccttcccgggtcgctggccggggatttgcgaaccaaagca
accattgagctcaaggccctcaggctgctgaacttccagaggcagctacggcaggaggtg
gtggtgtgcatgcggagggacacggcgctcgagacggccctcaatgccaaggcctacaag
cgcagcaagcggcagtccctgcgtgaggctcgcatcaccgagaagctggagaagcagcag
aagatcgagcaggaacgcaagcgccggcagaagcaccaggaatacctcaacagcattctt
cagcatgccaaggatttcaaagaatatcacagatcggtcacaggcaaaattcagaagctc
acgaaggcagtggccacgtaccatgccaacacagagcgggaacagaagaaggaaaacgaa
agaatcgagaaggagaggatgcggaggctcatggcggaagatgaggaagggtaccgcaag
cttatcgaccagaagaaggacaagcgcttggcctacctcttgcagcagacggatgagtat
gtggctaacctcacggagctggtgcggcagcacaaggctgcccaggttgccaaggagaag
aagaagaagaaaaaaaagaagaaggcagaaaacgcagaaggacaaacgcccgcaattgga
cctgatggcgagcctctggacgagaccagccaaatgagcgacctgcctgtgaaagtgatc
cacgtggagagtgggaagatcctcacgggcacggatgcccccaaagcagggcagctggag
gcctggctcgagatgaacccaggatatgaagtagctccaagatctgatagtgaagaaagt
ggctcagaagaagaggaggaggaggaggaggaagagcagcctcagccatcacagcctccc
accctgcccgtggaggagaagaagaagattccagatccagacagtgacgacgtctccgag
gtggacgcccggcacatcattgagaatgccaagcaagatgtcgatgatgagtacggcgtg
tcccaggcactcgctcgtggcctgcagtcctattatgctgtggctcatgccgtcactgag
agggtggataagcagtcggcgcttatggtcaacggtgtcctcaaacagtaccagatcaag
ggtttggagtggctggtgtccttgtacaacaacaacctgaacggcatcctggccgacgag
atgggtctgggaaagaccatccagaccatcgcgctcatcacatacctcatggagcacaag
cgcatcaacgggcccttcctcatcatcgtacctctctcaacgctgtcaaactgggcatac
gaatttgacaagtgggctccctctgtggtgaaggtgtcgtataagggctctccagcagcc
agacgggcttttgtccctcagcttaggagtggcaaattcaatgtcttgctaacgacatac
gagtacatcattaaagacaagcacattcttgcaaagatccgttggaagtacatgatcgtg
gacgaaggccaccgcatgaagaaccaccactgcaagctgacccaggtcctcaacacgcac
tacgtggcccctcgccgcctgctgctgacgggcacaccgctacagaacaagctccctgag
ctctgggcgctccttaacttccttctgcccaccatcttcaagagctgcagcaccttcgaa
cagtggtttaatgcgcccttcgccatgactggagagaaggtggacctgaacgaggaggag
accatccttatcatccgccgtctccacaaagtgctgcgacccttcctgctccggaggctc
aagaaagaggtcgaggctcaattgcccgagaaggtggagtacgtcatcaagtgcgacatg
tctgccctgcagcgtgtgctctaccggcacatgcaggccaagggggtgctgctgaccgac
ggttccgagaaggacaagaagggcaaaggtggcaccaagaccctgatgaacaccatcatg
cagctgaggaagatctgcaaccacccgtacatgttccagcacatcgaggagtcattttcc
gagcacctgggctttactggtggcattgtccaagggctggacctctaccgagcctcgggg
aaattcgagctcctagatagaattctgcccaaactccgtgccaccaaccataaagtgctg
ctcttctgtcagatgacctccctcatgacgatcatggaagattattttgcttatcgtggc
tttaaatacctcaggcttgatggaaccacaaaagccgaagaccggggcatgctgctgaaa
accttcaacgagcctggctctgagtacttcatcttcctgctcagcacccgggccgggggg
ctgggcttaaacctccagtcggctgacactgtgatcattttcgacagtgactggaacccc
caccaggacctgcaagcacaggaccgcgcccaccgaatcgggcagcagaatgaggtgcgt
gtgctccgcctctgcactgtcaatagcgtggaagagaagattctggccgcagccaagtac
aagctcaacgttgaccagaaggtgatccaggctggcatgttcgaccagaagtcctctagc
cacgagaggcgcgccttcctgcaggccatcctggagcacgaggagcaggacgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaagaagacgaagtgcccgacgacgag
accgtgaaccagatgattgcccggcacgaggaggagttcgacctgttcatgcgcatggac
ctcgaccgcaggcgtgaggaggcccgaaaccccaagcggaagccgcgcctgatggaagag
gacgagctgccctcatggatcatcaaggacgatgctgaggtggaacggctgacttgtgag
gaagaggaggaaaagatgtttggccgcggctcccgccaccgcaaggaggtggactatagc
gactcgctgactgagaagcagtggctcaagaccctgaaggccatcgaggagggcacgctg
gaggagatcgaagaggaggtccggcagaagaaatcatcgcggaagcgcaagcgggacagc
gacgccggctcctccaccccgaccaccagcacccgcagccgcgacaaggacgacgagagc
aagaagcagaagaagcgcgggcgaccgcccgctgagaagctctcccccaacccgccaaac
ctcaccaagaagatgaagaagatcgtggatgccgtcatcaagtacaaggacagtagtagt
ggacgtcagctcagcgaggtgttcatccagctgccctcccgcaaagagctgccggagtac
tacgagctcatccgcaagcctgtggacttcaagaagattaaggagcgcatccgcaaccac
aagtaccgcagtctcaacgacctggagaaggatgtcatgttgctgtgccagaacgcccag
accttcaacttggagggctccctgatctacgaagactccattgtgctgcagtccgttttc
accagcgtgcggcagaaaatagagaaagaggatgacagcgaaggcgaggagagcgaggag
gaagaagagggcgaggaggaaggctcggagtccgaatcccgctcggtcaaagtgaagatc
aagctgggccggaaggagaaggcacaggatcggctgaaggggggccggcggcggccaagc
cgtgggtcccgggccaagccagtggtgagcgacgatgacagtgaggaggagcaggaggag
gaccgctcaggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
