Pteropus vampyrus (Indian flying fox): 120611176
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Entry
120611176 CDS
T07511
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03013
Nucleocytoplasmic transport
pgig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120611176 (CASC3)
03015 mRNA surveillance pathway
120611176 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120611176 (CASC3)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120611176 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
120611176
NCBI-ProteinID:
XP_039729509
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPPRGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVEMKSEAN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPMENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERSNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGSFKEGRAGFRPVEAGGQHGGRSGETVKHETGYRSRRLEQTPVR
DPSPEADAQVLGSPEKEEAASEITAPAPDTAPPAPDRPIEKKSYSRARRTRIKAGDSVKV
AEEVPPPPEGLPPAPPAPETTPPPPAKTGNWEAPVDSTTGGLEQDMAQLNITEQNWSPGQ
PSFLPPRELRGMHNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaggataccgaagacgaagagtctggtgct
tccggctcagacagcggaggttctcctccgcggggcggcgggagttgcagcgggagcgct
ggaggtggcggcagcggctctctgccttcccagcgcggaggccgagccggggcccttcat
ctacggcgggtggagagcggaggggccaagagcgctgaggagtccgagtgtgagagtgaa
gatggcatcgagggcgatgctgttctgtcggattatgaaagtgcagaagactcagaaggt
gaagaaggggaatacagtgaagaggaaaactccaaagtggagatgaaatcagaagccaac
gatgctgctaattcttcagcaaaagaagagaagggtgaagagaagcctgacaccaaaggc
actgtgactggagagaggcaaagtggggatggacaggagagcacagagcctatggagaac
aaagtgggtaaaaagggccccaagcatttggatgatgacgaggatcggaagaacccagca
tacatacctcggaaagggcttttctttgagcatgatcttcgggggcaaactcaggaagag
gaagtcagacccaaggggcgtcagcgaaagctatggaaggacgagggtcgctgggagcat
gacaagttccgagaagatgaacaggctccaaagtcccgacaggaactcattgctctttat
ggatatgacatccgttcagctcacaatcctgatgacatcaaaccccgaagaattcggaaa
cccaggtttgggagccctccacaaagagatccaaactggattggtgagcgatcaaacaag
tcccatcgccaccagggtcctggaggcaccctaccaccaaggacatttatcaacaggaat
gctgcaggtactggccgcatgtctgctcccaggaattactctcgatctgggagcttcaag
gaaggtcgtgcaggttttaggcctgtggaggctggtgggcagcatggtggccggtctggt
gagactgttaaacatgagactggttaccggtcacggcgcctggaacagactcctgtgaga
gatccgtctccagaagcagatgctcaagtgcttggcagtcctgagaaggaagaggctgcc
tcagagataacagctcctgctcctgacactgcaccaccagcccctgacaggcctattgag
aagaaatcctattcccgggcaagaagaaccagaatcaaagctggggattcagtcaaggtt
gcagaggaggtgccccctccacctgaagggctgcccccggcacctccagctccagaaact
actcctcctccacctgctaagactgggaactgggaggctccagtggattctactacaggt
ggacttgagcaagacatggcacaactaaatataacagaacagaattggagtccagggcag
ccttcattcctgccaccacgtgaacttcggggtatgcacaaccacatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtggacgagccaaa
cgctattcatctcagcggcagagacctgtgccagagccccctgcccctcctgtgcatatc
agtatcatggaaggacattactacgatcctctgcagttccagggaccaatctacacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatccccatcagacaccggcacctctgcccaatccaggcctctat
cccccaccagtgtccatgtctcccggacagccaccacctcagcagttgcttgctcctact
tatttttctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggg
gctctgcctcccccaccacctcctcatctgtatcctaatacacaggccccatcgcaggta
tatggaggagtgacttactataaccctgcccagcagcaagtacagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccacctgaggttgtaagcagg
ggttccagttaa
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