KEGG   Pteropus vampyrus (Indian flying fox): 120611176
Entry
120611176         CDS       T07511                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
pgig  Pteropus vampyrus (Indian flying fox)
Pathway
pgig03013  Nucleocytoplasmic transport
pgig03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pgig00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120611176 (CASC3)
   03015 mRNA surveillance pathway
    120611176 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgig03019]
    120611176 (CASC3)
Messenger RNA biogenesis [BR:pgig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     120611176 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 120611176
NCBI-ProteinID: XP_039729509
LinkDB
Position
Unknown
AA seq 703 aa
MADRRRQRASQDTEDEESGASGSDSGGSPPRGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVEMKSEAN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPMENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERSNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGSFKEGRAGFRPVEAGGQHGGRSGETVKHETGYRSRRLEQTPVR
DPSPEADAQVLGSPEKEEAASEITAPAPDTAPPAPDRPIEKKSYSRARRTRIKAGDSVKV
AEEVPPPPEGLPPAPPAPETTPPPPAKTGNWEAPVDSTTGGLEQDMAQLNITEQNWSPGQ
PSFLPPRELRGMHNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq 2112 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcggcagcgcgcttcgcaggataccgaagacgaagagtctggtgct
tccggctcagacagcggaggttctcctccgcggggcggcgggagttgcagcgggagcgct
ggaggtggcggcagcggctctctgccttcccagcgcggaggccgagccggggcccttcat
ctacggcgggtggagagcggaggggccaagagcgctgaggagtccgagtgtgagagtgaa
gatggcatcgagggcgatgctgttctgtcggattatgaaagtgcagaagactcagaaggt
gaagaaggggaatacagtgaagaggaaaactccaaagtggagatgaaatcagaagccaac
gatgctgctaattcttcagcaaaagaagagaagggtgaagagaagcctgacaccaaaggc
actgtgactggagagaggcaaagtggggatggacaggagagcacagagcctatggagaac
aaagtgggtaaaaagggccccaagcatttggatgatgacgaggatcggaagaacccagca
tacatacctcggaaagggcttttctttgagcatgatcttcgggggcaaactcaggaagag
gaagtcagacccaaggggcgtcagcgaaagctatggaaggacgagggtcgctgggagcat
gacaagttccgagaagatgaacaggctccaaagtcccgacaggaactcattgctctttat
ggatatgacatccgttcagctcacaatcctgatgacatcaaaccccgaagaattcggaaa
cccaggtttgggagccctccacaaagagatccaaactggattggtgagcgatcaaacaag
tcccatcgccaccagggtcctggaggcaccctaccaccaaggacatttatcaacaggaat
gctgcaggtactggccgcatgtctgctcccaggaattactctcgatctgggagcttcaag
gaaggtcgtgcaggttttaggcctgtggaggctggtgggcagcatggtggccggtctggt
gagactgttaaacatgagactggttaccggtcacggcgcctggaacagactcctgtgaga
gatccgtctccagaagcagatgctcaagtgcttggcagtcctgagaaggaagaggctgcc
tcagagataacagctcctgctcctgacactgcaccaccagcccctgacaggcctattgag
aagaaatcctattcccgggcaagaagaaccagaatcaaagctggggattcagtcaaggtt
gcagaggaggtgccccctccacctgaagggctgcccccggcacctccagctccagaaact
actcctcctccacctgctaagactgggaactgggaggctccagtggattctactacaggt
ggacttgagcaagacatggcacaactaaatataacagaacagaattggagtccagggcag
ccttcattcctgccaccacgtgaacttcggggtatgcacaaccacatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtggacgagccaaa
cgctattcatctcagcggcagagacctgtgccagagccccctgcccctcctgtgcatatc
agtatcatggaaggacattactacgatcctctgcagttccagggaccaatctacacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatccccatcagacaccggcacctctgcccaatccaggcctctat
cccccaccagtgtccatgtctcccggacagccaccacctcagcagttgcttgctcctact
tatttttctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggg
gctctgcctcccccaccacctcctcatctgtatcctaatacacaggccccatcgcaggta
tatggaggagtgacttactataaccctgcccagcagcaagtacagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccacctgaggttgtaagcagg
ggttccagttaa

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