Pteropus vampyrus (Indian flying fox): 120611399
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Entry
120611399 CDS
T07511
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8
KO
K13191
RNA-binding protein 16
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgig03021
]
120611399 (SCAF8)
03041 Spliceosome [BR:
pgig03041
]
120611399 (SCAF8)
Transcription machinery [BR:
pgig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120611399 (SCAF8)
Spliceosome [BR:
pgig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120611399 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120611399
NCBI-ProteinID:
XP_039729797
LinkDB
All DBs
Position
Unknown
AA seq
1284 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPAVTPVLASTTAAMSNTPG
TPVTPVTPANVVQGLPDPWVSQIANTDTLTAVAQILQSPQGQQFQQLIQTLQIQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAASTLNPLEQGVPFNKKLMDRFDFGEDSEHSEEP
KKEIPTSQLSHVSESVNSSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFG
SEHSASPSQGSSQQHFLEPEANLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSR
SRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKER
QKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCM
VHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVD
DLEGFAEGGMIDQETVNTEWETVKSSEPVKETAPTTQSPAPVDKETVVTTQAEAFPPPVA
MLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPFLRASFNPSQPPPGFMPPPVPPP
VVPPPAIPPVVPSLVQPPLSMTPETVKDVGFGGLVLPGGSVAGSLAAGNVFNPPTKQAEP
EEKVPHLIDHQISSGENTRSVIPNDISSSSAILGGQPPNVTSNSGILGVQRPNVSSSSEI
LGVRPSNVSGSSGIIGAQPPNILNNSAILGIQPPGVSSSSGLLGVLPPNVPSSPGLIGVQ
PPNVPNASGLLATQPPAGPQNLPPLGLSGQRLPVVPVLDLRPGLIPQAPGPRFPLLQPGL
PPQRGIPPPSVLDAALHPPPRGPFPPGDLFSQPERPFLVPGRQSIDNITNPEKRIPLGNE
NIQQEGDRDYRFPPIETRESMSRPPPVDVRDMVGRPVDPREGPGRPPLDGRDHFGRPPVD
IRENLVRPGIDHLGRRDHFGFNPEKPWGPRDFDEREHRVLPVFAGPKGLHEERGRFRSGN
YRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRLGRERIQNTW
VPPPHARVFDFFEGATSQRKGDSVPQVNGENTERHAQPPPLPVQNDPELYEKLTSSSEIN
KEKSDTVADIESEPVVESTETEGT
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaagaccttcaatagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatattgtattccctgaatgactacaaacca
ccaatttctaaagcgaaaatgacccaaattactaaggcagccatcaaagctattaagttc
tataaacatgtggtacagagtgttgagaaattcattcagaaatgtaaaccagaatacaag
gtacctggactttatgttattgactccattgtacgacaatctcgacatcagtttggtcaa
gaaaaggatgtctttgcacccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtgttaaacttatggcagaag
aataatgtatttaagagtgagattattcagcctcttctggatatggcagcggggattccc
cctccagctgtcacacccgttctggccagcaccactgctgccatgagcaacaccccagga
actcctgtgacacctgttactccagccaatgtggtccaaggtttacctgacccgtgggta
tctcagatagcaaacacggatacgcttacggctgtagctcagatcttgcaaagtcctcaa
ggccagcagtttcagcagttaatacagactttacagatacagcagcagaagcctcagcct
tccattctacaggccctggacgctggcctcgtggttcagttgcaggctcttacggcacag
ctgacggcggcggcggcagcagctagcaccctcaatcccttagaacagggagtgcccttt
aacaagaagttgatggatagatttgattttggggaagattctgagcatagtgaagaaccc
aaaaaggaaattccaacttctcaactttctcatgtttcagaatctgtgaacagttccatt
tttcatcagatagcagaacagctacagcaacaaaaccttgaacatctccgacagcaactc
ctggaacagcaacagcctcaaaaggcaacccctcaggatagtcaagaagggacattcgga
tcagagcattcggcatcaccatcacaagggagcagtcaacagcatttccttgaacctgaa
gcaaatttggatgattccatagatattcagcaacaggacatggatatagatgaagggcaa
gatggagtggaagaggaaatcttcgaacaagaagcaaagaaagtggctgttcgctctaga
tcaagaacacattcacgatctcgttcaaggtcaccaagaaaacgaaggtccaggtcacga
tctggttctcggaagcgtaagcacagaaagcgatcgcgctcgcgctccagggaaaggaaa
aggaagtcatctcgctcgtactccagcgagagaagagctagagaaagggagaaggaacgg
cagaagaaggggttacctcccatcaggtccaaaacattaagcgtatgtagtactactctc
tgggttggtcaggtggacaagaaggcgacacagcaggatttaaccaacctgtttgaagag
tttggacaaatcgaatccattaatatgattcctcccaggggctgtgcttatgtctgcatg
gttcatcgacaggatgcgtttcgggctctgcagaaacttagttctggatcgtataaaatc
gggtccaaggtcattaagattgcttgggctttaaacaaaggtgtaaaaacagaatacaag
caattctgggatgtggatcttggagttacatatataccgtgggaaaaagttaaagtggat
gacttggaaggttttgcagaaggaggcatgatcgatcaggaaactgtaaatactgagtgg
gaaactgtgaaaagctcagagcctgtcaaagagacggccccgacaactcagagcccagct
cccgttgacaaggagacagtggtcacaacccaggccgaagcttttcctccacccgttgct
atgttacagattccagtagcaccagccgtgcctacagttagcttagtcccaccagcattt
cctgtgtcaatgccggtccctcctcctggcttcagtccaatcccgccgcctttcctccga
gcaagtttcaacccttcacaaccaccgcctggtttcatgccacctccagttccaccacct
gtcgtgcctccacctgctattccaccagtagtaccatcgttagtgcagccaccgttatcc
atgactccggaaactgtgaaagacgttggatttggtggcctcgttttaccagggggttct
gttgctggcagccttgcagctggaaatgttttcaatcctccaaccaaacaagcggagcct
gaagaaaaagtacctcatcttattgaccaccagatttcttctggcgaaaacaccagatct
gtgattccaaacgatatttcaagtagctctgcaattttaggaggacagccacccaatgtg
acgagcaattctggaattctgggagttcaaagaccaaatgtatcgagcagttctgagatt
cttggagtccggccttctaatgtttccggtagttctggaattattggagcccagccacca
aatattctcaataactctgcaattttgggaatacagccaccaggtgtttcgagtagttct
ggactcttgggagtgctgcccccaaacgtccccagcagtcctggacttataggagtacag
ccaccaaacgttccgaatgcatctggacttttggcaacccagccgccagctgggcctcag
aacttaccccctctcggtctctctggtcaaaggctgcctgtcgtgccagtgttagacctt
cgtccaggactaataccacaggcaccggggccacgatttcccctgttgcagcccggactt
ccgccccagcgagggatccctcccccgtcggtgcttgacgcagctcttcatccaccaccc
cgcggtccttttcctccaggagatctttttagtcagccagaaagaccttttctagttcct
ggaaggcaaagtatagacaatatcactaatcccgaaaaaaggataccgcttgggaacgag
aacattcaacaggaaggagacagagattaccggtttcctcccatagaaaccagggagagc
atgagcaggcctcccccggtggacgttagggacatggtcggacggcctgtagacccaagg
gaaggtcctgggaggcctccattagatggtagggatcattttggaagaccgcctgtagat
atcagagagaatcttgtgaggccaggtatagatcatcttggtcgcagagaccactttggc
tttaatccagagaagccctgggggcctagagatttcgatgagcgagagcatcgggttctg
cctgtcttcgctggtccaaaaggcctacatgaagaaagaggcagatttcggtctggaaac
tatcggtttgatcctagaagtggtccttggaacagaggatttggacaagaagttcacaga
gattttgatgaccgcagaagaccctgggagaggcagagggatagggatgacagagatttc
gatttctgcagagaaattaatggaaatcgtcttggacgagagagaattcaaaacacctgg
gtcccccctcctcatgctcgggtttttgatttctttgaaggggccacttctcaacgaaaa
ggtgacagtgtgcctcaggttaatggtgaaaatactgagagacatgctcagccaccgccc
ttaccagtacagaatgaccctgaactttatgagaaactgacatcttcaagtgaaataaac
aaggagaagagtgacacagttgctgatatagaaagtgaaccagtggtagaaagcacagaa
actgaggggacataa
DBGET
integrated database retrieval system
