Pteropus vampyrus (Indian flying fox): 120612369
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Entry
120612369 CDS
T07511
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120612369 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgig02000
]
120612369 (ABCA4)
Transporters [BR:
pgig02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
120612369 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_15
AAA_23
AAA_22
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
120612369
NCBI-ProteinID:
XP_039730750
LinkDB
All DBs
Position
Unknown
AA seq
2142 aa
AA seq
DB search
MEALIPCQALMLGVRERRLQRLTSLCLALLGKGIRILDVLKDEETLTLFLMKNIGLSDSV
VHLLVNSQVRPEQFAHGVPDLVLKDIACSEALLERFIIFSQRRGAQTVRDAMCSLSQGTL
QWVEDTLYANVDFFKLFRVLPTLLDSSSQGINLRSWGKILSDLSPRIQEFIHRPSVQDLL
WVTRPLMQTGGPDTFTQLAGILSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSMRKD
PVYSYDKRTTTFCNALIQSLESNPLTKIAWRAAKPLLMGKILFTPDSPAARSILKNANST
FEELERVRKLVKAWEEVGPQIWYFFDKSTQMTTIRDTLANPIVKGLLDKQFGEEGITAEA
ALNFLYKGPRESQADDMANFDWRDIFNFTDRALRLANRFLECLILDKFESYDDEIQLTQR
ALSLLEENRFWAGVVFPDMYPWTSSLPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADP
VEDFRYIWGGFAYLQDMVEQGITKSQVGAEVPVGIYLQQMPYPCFVDDSFMIILNRCFPI
FMVLAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNTVIWCTWFLDSFSIMSMSIFLLTI
FIMHGRILHYSNPFILFLFLLAFSTATIMQCFLLSTFFSRASLAAACSGVIYFTLYLPHI
LCFAWQDRMTADLKMAVSLLSPVAFGFGTEYLARFEEQGLGLQWSNIGNSPMEGDEFSFL
MSMKMMLLDAALYGFLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTRQERALEKT
EPITEEMEDPEHPEGIYDSFFERELPGSVPGVCVKNLVKVFEPYGRPAVDRLNITFYENQ
ITAFLGHNGAGKTTTLSILTGLLPPTSGTVLIGGKDIETSLDAVRQSLGLCPQHNILFHH
LTVAEHILFYAQLKGKSWDEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFV
GDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGR
LYCAGTPLFLKNCFGTGFYLTLVRKMKNIQSQKTGCKGTCSCASKDSSIRCPAHVDEITP
EQVLDGDVNELMDVVHHHVPEAKLVECIGQELIFLLPNKNFKQRAYANLFRELEETLAEL
GLSSFGISDTPLEEIFLKVTEDSDSGPLFTGSTQQKRETISLRNPYLGSSKGYSADPAQG
QPSPEPKQQGGRLNTGAQLIFQHVQALLVKRFHHALRSHKDFLAQIVLPATFVFLALMLS
IVVPPFGEYPALTLHPWMYGQQYTFFSMDQPGSERLTALADVLLNKPGFGNRCLKEEWLP
EYPCGNSTPWKTPSVSPNVTHVFQKQKWTPEHPSPSCRCSTREKLTMLPECPEGAGGLPP
PQRVQRSTEILQDLTDRNISDFLVKTYPALIRSSLKSKFWVNEQRYGGISIGGKLPVLPI
TGEALVGFLSDLGQIMNVSGGPITREASKEMSAFLQHLETEDNVKVWFNNKGWHAMVSFL
NVAHNAILRASLPQDRNPEEYGITVISQPLNLTKEQLSEITVLKTSVDAVVAICVIFAMS
FVPASFVLYLIQERVNKAKHLQFVSGVSPITYWLTNFLWDIVNYAVSAALVVGIFIGFQK
KAYTSPNNLPALVALLMLYGWAIIPMMYPASFLFDVPSTAYVALSCANLFIGINSSAITF
ILELFENNRTLLGFNAMLRKLLIIFPHFCLGRGLIDLALSQAVTDVYARFGEEHSSNPFQ
WDLIGKNLVAMAAEGVIYFLLTLLAQHHFFLTQWNAEPTKEPIVDEDDDVAEERQRIISG
GSKTDILSLNELTKIYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV
TSGDATVAGKSILTNISEVHQSMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIERVA
NWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWN
TIMSIIREGRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLKYKFGDGYIVTMKI
KSPKDDLLPDLNPVEQFFEGNFPGSVQRERHYNMLQFQVSSSSLARIFRLLVSHKDSLLI
EEYSVTQTTLDQVFVNFAKQQTEIHDLPLHPRAAGASRQAKI
NT seq
6429 nt
NT seq
+upstream
nt +downstream
nt
atggaggccctgattccatgtcaggctctaatgctgggtgtcagagagaggagacttcaa
aggcttacatctttgtgtctggcattgctaggaaaaggaatacgaatcctggatgtccta
aaagatgaagaaacactgacactatttctcatgaaaaacattggcctgtctgactcagtt
gtccaccttctggtcaactcccaggtccgaccagagcagtttgctcatggagtcccagac
ctggtgctgaaggacattgcctgcagtgaggccctcctggagcgcttcataatcttcagc
cagagacgtggagcacagacagtacgtgatgccatgtgctccctctcccagggcacctta
cagtgggtggaagacactctgtatgccaacgtggacttcttcaagctcttccgtgtgctt
cctacactcctagacagcagttcccaaggtatcaatctgcgatcctgggggaaaatatta
tctgatctgtcaccaagaattcaagagttcatccatcgaccgagtgttcaagacttgctg
tgggtgaccaggcccctcatgcagactggcggtccagacaccttcacacagctggcaggc
atcctgtctgatctcttatgcggctacccagaaggaggaggctctcgggtgttctccttc
aactggtatgaagacaataactataaggccttcctggggattgactccatgaggaaagat
cctgtctattcttatgacaaaagaacaacgaccttttgtaatgcattgatccagagcctg
gagtccaaccctctaaccaaaatagcatggagggcagcaaagcctctgttaatgggaaaa
atcctctttactccggattccccagcagcacgcagtatactgaaaaatgccaactcaact
tttgaagagctggagcgtgttaggaagttggtcaaagcctgggaagaagtggggccccag
atctggtacttctttgacaagagcacacagatgaccacgatccgagacaccctggcaaac
ccaatagtaaaaggccttttggataagcagtttggtgaagaaggtattactgccgaagct
gcgctgaacttcctgtataagggtcctcgagagagccaagctgacgacatggccaacttc
gactggagagacatatttaacttcactgatcgtgccctacgcctggctaatcgattccta
gagtgcttgatcctggacaagtttgaaagctacgatgatgaaatccagctcacacaacga
gccctgtctctgctggaggaaaacaggttctgggctggtgtggtgttccctgacatgtac
ccctggaccagctccctaccaccgcacgtgaagtacaagatccgaatggatatagatgtg
gtggagaaaaccaacaagatcaaagacaggtactgggattctggtccccgagctgatccc
gtggaagatttccgatacatctggggaggatttgcctatctacaggacatggttgaacag
gggatcacaaagagtcaggttggggccgaggttccggttggaatctacctccagcagatg
ccttacccctgcttcgtggatgactcttttatgatcatcctgaaccgctgtttccctatc
ttcatggtgctggcctggatctactcagtctccatgactgtaaagagcatcgtcttagag
aaggagttgagactgaaggagactttgaaaaatcagggtgtctccaacacagtgatttgg
tgtacttggttcctggacagcttctctatcatgtcaatgagcatcttcctcctgacaata
ttcatcatgcatgggaggatcctacattatagcaacccattcatcctcttcctgttcctg
ttggctttctccaccgctacgatcatgcagtgcttcctgctcagcaccttcttctccaga
gccagcctggcagcagcctgcagtggtgtcatctacttcaccctttacctgcctcacatt
ctctgcttcgcctggcaggaccgaatgacggccgatctcaagatggctgtgagcctgctg
tctcctgtggcatttgggtttggcactgagtacctggctcgctttgaggagcaaggcctg
gggctgcagtggagcaatattgggaatagtcccatggaaggggatgaattcagtttcctg
atgtccatgaagatgatgcttctcgatgctgctctgtatggctttcttgcctggtacctt
gaccaggtgtttccaggggactatggaaccccacttccttggtatttcctactccaagag
tcctattggcttggcggcgaagggtgttcaaccagacaagaaagggccctggaaaagacg
gaacccataacagaggaaatggaggacccggaacacccggaaggaatatatgactccttc
tttgaacgtgagcttccaggctcggttcctggggtatgtgtgaagaatctggtaaaggtt
tttgagccctacggcaggccagctgtggaccgtcttaacattaccttctatgagaaccag
atcaccgcattccttggtcacaacggagcagggaaaaccaccaccttgtccatcctgacg
ggtctattgccaccgacatcagggaccgtgctcattgggggaaaggacattgaaaccagc
ctggatgcagtacggcagagcctcggcctgtgtccccaacacaacatcttgttccaccac
ctcacagtggctgaacacatcctgttctacgcccagctgaaagggaagtcatgggacgag
gcccagctagagatggaagccatgttggaagacacaggcctccatcacaagaggaatgaa
gaagctcaggatctatcaggtggcatgcagaggaagctgtccgttgccattgccttcgtg
ggagatgccaaagtggttgttttggatgagcctacctctggggtggacccttattcaaga
cgctcaatctgggacctgctcttgaagtatcgctcaggcaggaccatcatcatgtccact
catcacatggacgaggccgatctccttggggaccgcatcgccataatttcccagggaagg
ctctactgcgcaggcaccccactcttcctgaagaattgttttggcacgggcttctactta
accttggtgcgcaaaatgaaaaacatccagagccagaaaacgggctgcaaggggacctgc
agctgtgcatctaaggattcctccatcaggtgtccagcccatgtagatgagataactcca
gaacaagtcttggacggggatgtgaatgagctgatggatgtggttcatcaccacgttcca
gaggcaaagctggtagaatgcattggtcaagaactgatcttcctccttccgaataagaat
ttcaagcagagggcatatgccaacctttttagagagctggaggagacactggctgaactg
gggctcagcagctttggaatttctgacactcccctggaagagatatttctgaaagtcaca
gaggattctgattcaggacctctgtttacaggcagcactcagcagaaaagagaaaccatc
agcctacgaaacccctacctgggttctagtaagggctactctgcagatcctgcccagggc
cagccttccccagagccaaagcagcagggcggccgcctgaacacgggagcccagctcatc
ttccagcacgtgcaggcactgctggtcaagcgattccaccacgctctccgcagccacaag
gacttcctggcccagatcgtgctcccagcgacttttgtgtttctggctctgatgctttcc
atcgtcgtcccgccgtttggtgaatatcctgctttgacccttcacccctggatgtatggg
cagcagtacaccttcttcagcatggaccagccaggcagtgagcggctcacagcacttgca
gatgtcctcctgaacaagccaggctttggcaaccgctgcctaaaggaagagtggcttccg
gagtacccctgtggcaattccaccccctggaagacaccctctgtttccccaaacgtcacc
cacgtgttccagaagcagaagtggacgccagagcacccctcaccttcctgcaggtgcagc
accagagagaagctcactatgctccccgagtgcccggagggcgcaggggggctcccaccc
ccgcagagagtacagcgaagcactgaaattctacaagaccttacagacaggaatatctct
gacttcttggtaaaaacatatcccgctcttatacgcagcagcttaaagagcaaattctgg
gtcaatgaacagaggtacggaggaatttccatcggaggaaagctgccagttctccccatc
actggggaagcacttgttggatttttaagcgaccttggccagataatgaatgttagcggg
ggccctattacaagagaggcgtctaaagaaatgtctgctttcctccaacatctagaaacg
gaagacaacgttaaggtgtggtttaacaacaagggctggcatgccatggtcagctttctc
aacgtggcccacaacgccatcttacgggccagcctaccccaggacaggaaccccgaggag
tatggcatcaccgtcataagccagcccctgaacctgaccaaggagcagctctcagagatt
acagtgctgaaaacttcggtggatgctgtggttgccatctgtgtgattttcgccatgtcc
ttcgtcccagccagctttgtcctttatttaatccaggagagagtgaacaaagccaagcac
ctccagtttgtcagcggagtgagccctatcacctactggttgaccaactttctctgggac
attgtgaattatgctgtgagtgctgccctggtggtgggcatcttcatcggatttcagaag
aaagcctacacttctccaaacaatcttcctgcccttgttgcactgctcatgctgtacgga
tgggcaatcattcccatgatgtacccagcatccttcctgtttgatgtccccagcactgcc
tatgtggccttgtcttgtgctaatctgttcatcggcatcaacagcagtgccatcaccttc
attttagaattatttgagaataaccggacgctgctcgggttcaatgccatgctgagaaag
ctgctcattatctttccccacttctgcctgggccggggcctcattgacctggcgctgagc
caggctgtgacagatgtctatgctcggtttggtgaggaacactcttcaaatccgttccag
tgggacctgattgggaagaacctggttgccatggcagcagaaggggtgatatacttcctc
ctgaccctcctcgcccagcaccacttcttccttacccaatggaatgccgagcccacgaag
gagcccatcgttgacgaggatgatgatgtggctgaagaaagacaaagaattattagtgga
ggaagtaaaactgatatcttgagtctaaatgaactaaccaagatctattcaggcacctcc
agcccagcggtggacaggctgtgtgtgggagttcgtcctggagagtgctttggcctcctg
ggagttaacggagctggcaaaacaaccactttcaagatgctcactggggacaccacagta
acatcaggtgatgccactgtagcaggcaagagtattttaaccaatatttctgaagttcat
caaagtatgggctactgtcctcaatttgatgcaattgatgacctgctcacggggcgagaa
catctttacctttatgcccggcttcgaggtgtaccagcagaggaaatcgagagggtggca
aactggagtattcagagcctgggcctctctctctatgcggaccgcctggcaggcacctac
agtgggggcaacaagcggaaactctccacagccattgccctgatcggctgcccgccactg
gtgctgctggatgagcccaccacaggcatggacccccaagcacgccgcatgctatggaac
accatcatgagcatcattagagaagggagggctgtggtcctcacatcccacagtatggaa
gaatgtgaggccctgtgtacccggctggctatcatggtgaagggcacatttcagtgtctg
ggcacaattcagcacctcaagtacaagtttggagatggctacatcgtcacaatgaaaatc
aaatccccaaaggacgacttgctccctgatctgaaccccgtggagcagttcttcgagggg
aacttccccggcagcgtgcagagagagagacactacaacatgctccagttccaggtctcc
tcctcctccctagccaggatcttccggctgctcgtctcccacaaggacagtctactcatt
gaggagtactcggtcacacagaccacgctggaccaggtatttgtgaactttgctaaacag
cagactgaaattcacgacctccctctgcacccccgagctgctggagccagccgacaagcc
aagatctga
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integrated database retrieval system
