Pteropus vampyrus (Indian flying fox): 120612577
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Entry
120612577 CDS
T07511
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgig03021
]
120612577 (CHD1)
03036 Chromosome and associated proteins [BR:
pgig03036
]
120612577 (CHD1)
Transcription machinery [BR:
pgig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
120612577 (CHD1)
Chromosome and associated proteins [BR:
pgig03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
120612577 (CHD1)
SLIK complex
120612577 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
120612577
NCBI-ProteinID:
XP_039731108
LinkDB
All DBs
Position
Unknown
AA seq
1715 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGT
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQQQQQQQHQA
SSNSGSEEDSSSSEDSDDSSSEAKRKKHKDEDWQMSGSGTPSQSGSDSESEEERDKSSCD
ETESDYEPKNKVKSRKPQNRSKSKNGKKILGQKKRQIDSSEEEDDEEDYDNDKRSSRRQA
TVNVSYKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYA
VEADGDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKD
QETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGL
PYSECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGH
EGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLV
VPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEIL
LKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSL
LHFIMPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRM
EMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNK
QEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDG
SIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQA
RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSS
STPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELL
SQFKVANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNC
AKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIK
SYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGK
VKGPTFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKE
DDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKD
IARKEAQRLSGAGGSKRRKARAKKNKAMKSIKVKEEMKSDSSPLPSEKSDEDDKLSESKS
DSKERSKKSAVSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQLDRPE
KGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHK
LYKHAIKKRQESQQNNDQNSNLNAQVIRNPEVERIKENTNHDDSSRDSYSSERHLSQYHD
HHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQDSRYYSDREKHRKLDDHRSRDH
RSNLEGSLKDRSHSDHRSHSDHRSHSDHRSSSEYTHHKSSRDYRYHSDWQMDHRASSSGP
RSPLEQRSPYGSRSPFEHSTEHKSTPEHTWSSRKT
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcctcaggctcgggatctggttcgagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactctggatctgaatcgggcact
cagtcagagtctgagtcagacacttcacgagagaacaaagttcaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtattctggctgttcagagatctgca
atgctcaagaagcagcagcagcagcagcagcagcagcagcaacaacaacaacatcaagct
tcatctaatagtggatcagaagaggattcctctagcagtgaagattctgatgactcatcg
agtgaggccaaaaggaaaaagcataaagatgaagattggcaaatgtctgggtcgggaact
ccatctcagtctggttcagattcagaatctgaagaagaaagagataaaagcagttgtgat
gaaacagagtctgattatgaaccaaaaaacaaagttaaaagcagaaaacctcaaaatagg
tctaagtcaaaaaatgggaagaagattcttggacaaaaaaagagacagattgattcatct
gaggaagaggatgatgaagaagattatgataatgataaaagaagttctcgtcgccaggca
actgtcaatgttagctataaggaagacgaagaaatgaaaacagattctgatgacctactt
gaagtctgtggagaggatgttcctcaacctgaggaagaagaatttgaaactatagaacga
tttatggattgtcggattgggagaaaaggagctactggtgctactacaaccatctatgca
gttgaagcagatggtgacccaaatgcaggatttgaaaaaaataaggaaccaggagaaatc
cagtatttaattaaatggaaaggatggtcccatattcacaatacttgggagacagaagaa
acccttaagcagcagaacgttagaggaatgaaaaaattggataattataagaagaaagat
caggaaacaaaaagatggttgaaaaatgcttctccagaagatgtggaatattataattgc
cagcaagaacttacagatgatctacataaacagtatcaaatagtggagcgaataattgct
cattccaatcaaaagtcagcagctggttatcctgattattattgcaaatggcagggcctt
ccatactcagagtgcagctgggaggatggtgctctcatttccaaaaagtttcaagcatgt
atagatgagtattttagcaggaatcaatcaaaaaccactccttttaaagattgcaaagta
ttaaaacaaaggccaagatttgtagccctaaagaagcagccatcctatattggaggacat
gagggtttagaattaagagattatcaactgaatggtttaaattggcttgctcactcttgg
tgcaaaggaaatagttgtatacttgctgatgaaatgggccttggaaaaacaatacagacg
atctcatttctgaactatttgtttcatgaacatcaattatatggaccttttctattagta
gtaccactctctactcttacttcctggcaaagggaaattcagacatgggcttctcaaatg
aatgctgtggtttatttaggtgacattaacagcagaaacatgataagaactcatgaatgg
atgcatccccagaccaaacggttaaaatttaatatactgttaacaacttatgaaatttta
ttgaaggataaggcattccttggaggtcttaattgggcatttataggtgtagatgaagca
catcgattaaagaatgatgactctcttctatataaaactttaatagactttaagtccaat
caccgtctccttatcactggaactcctctacaaaattccctcaaagagctctggtctttg
cttcattttattatgccagaaaagttttcttcctgggaagattttgaagaagaacacggc
aaaggcagagaatatggttatgcaagcctccacaaggagcttgaaccgtttctgttacga
agagttaagaaagatgtggaaaaatctcttcctgccaaggttgagcagattttaagaatg
gaaatgagtgctttacagaaacaatattacaaatggatattaactaggaattacaaagcc
ctcagcaaaggttccaagggcagtacctcaggctttttgaatattatgatggagctaaag
aaatgttgtaatcactgctacctcattaaaccaccggataataatgaattctataataaa
caggaggccttacaacacttaatccgtagtagcggaaaattgatccttcttgacaaactg
ttaattcgcctgagagaaagaggcaatagagttcttattttttctcaaatggtgcggatg
ttagatattcttgcagaatatttgaaatatcgtcaattcccttttcagagattagatgga
tcaataaaaggggagctgaggaaacaagctctagatcattttaatgctgaaggatcagag
gatttctgctttttgctttccacaagagctggggggctaggaattaatttagcctctgct
gacactgttgttatatttgattctgattggaatccacaaaatgatcttcaggcacaggct
agagcacatcgaattgggcaaaagaaacaggtgaatatttatcgtctagttacaaaggga
tcagttgaagaggatattcttgaaagggccaaaaagaagatggttttagatcatcttgtg
attcaaaggatggacacaactgggaagacagtactacacacaggttctgccccctcaagt
tctactcctttcaataaagaggagttatcagccattttaaagtttggtgctgaagaactt
tttaaggaacctgaaggagaagaacaagagccccaggagatggatatagatgaaatctta
aagagggctgaaactcatgaaaatgaaccaggccctttaactgtaggagacgaattgctt
tcccagttcaaggttgccaacttttcaaacatggatgaggatgacattgaattggaacct
gaaagaaattcaaagaattgggaagaaatcattccagaagatcagagaaggcgattagaa
gaggaagaaagacaaaaggaactcgaagaaatttatatgctcccaagaatgagaaactgt
gctaaacagattagtttcaatggaagtgaagggaggcgcagtagaagtaggagatactct
ggatctgatagtgattcaatctcagaaaggaaaaggccaaagaaacgtggaagaccacgg
actatccctcgagagaatattaaaggatttagtgatgcagaaattcggcggtttatcaag
agttacaagaaatttggtggccctctggaaagattagacgcaattgctcgagatgctgaa
ttggttgataagtcagagacagacctcagacgactaggagaattagtacataatggttgc
attaaagctttaaaggataattcttcaggaacagaacggacaggtggtagacttggaaaa
gtaaagggtccaacattccgaatatcaggagtacaggtgaatgccaagctagtcatctcc
catgaagaagaattaataccattgcacaaatccattccttcagatccagaagaaagaaag
cagtatactatcccatgccatacaaaggcagctcattttgatatagattggggcaaagaa
gatgattccaatttgttaattggtatctacgaatatggatatggaagctgggaaatgatt
aaaatggatcctgacctcagtctaacacacaagattcttccagatgatcctgataaaaaa
ccacaagcgaaacagttgcagacacgtgcagactacctcatcaaattacttagtaaagat
attgcaagaaaagaagctcagagactctctggtgcaggaggttcaaagaggagaaaagca
agagctaagaagaataaagcaatgaagtctataaaagtgaaagaggaaatgaagagtgat
tcttctcccctgccttcagaaaagtctgatgaagatgataagttgagtgaatccaagtct
gatagcaaagaaagatccaagaagtctgcagtgtcagatgctccagttcatatcactgca
agtggtgaaccagttcccatatcagaagaatctgaagagctggatcaaaagacattcagc
atttgtaaagaaagaatgaggcctgtcaaagcagctttgaaacaacttgataggcctgag
aaaggcctttcagaaagagaacaactggagcatactagacagtgtttaataaaaattgga
gaccatatcacagaatgtctgaaagagtatacgaatcctgaacaaatcaagcagtggaga
aaaaacctgtggatttttgtatctaagtttaccgagtttgatgcaagaaaattacataaa
ttatataagcatgctattaaaaaacggcaggaatctcagcaaaataatgaccagaacagc
aacttgaatgctcaagtgattcgaaatccagaggtagaaagaataaaggagaatacaaat
cacgatgatagcagcagggacagttattcatctgagagacacttatctcagtatcatgat
catcataaagaccgacatcagggagattcttacaaaaagagtgactctaggaaaagacct
tattcttcttttagtaatggtaaagatcatcgtgattgggatcactacaagcaggacagc
agatattacagcgatagagagaaacacagaaaactggatgatcatagaagtagagatcac
aggtcaaatttggaaggaagtttaaaagatagatctcattctgatcatcgttctcattca
gatcatcgttctcattcagatcatcggtcaagttcggaatatacacatcataaatcttcc
agggattataggtatcactcagattggcaaatggaccacagagcttccagtagtgggcct
cggtcaccactagagcagaggtctccttatggctccagatctccatttgaacactcaact
gaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
DBGET
integrated database retrieval system
