Pteropus vampyrus (Indian flying fox): 120613355
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Entry
120613355 CDS
T07511
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig00100
Steroid biosynthesis
pgig01100
Metabolic pathways
Module
pgig_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120613355 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pgig01006
]
120613355 (FDFT1)
Enzymes [BR:
pgig01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
120613355 (FDFT1)
Prenyltransferases [BR:
pgig01006
]
Terpene biosynthesis
Squalene/phytoene synthase
120613355 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
120613355
NCBI-ProteinID:
XP_039732011
UniProt:
A0A6P3Q1S2
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MAAAACGIKAMSLFKRTLVLSPTAAPRVTSTGISPRGCSLPPATWPSKDWPRGEGVCRRL
WSPTAAGHLPQSHSCSSTSPTSACLLCPQDSLSSSLKTCYKYLRQTSRSFAAVIQALDGE
MRNAVCIFYLVLRALDTLEDDMTINLEVKVPMLQNFHSYLYEPNWCFMESKERDRQVLED
FPTISFEFRNLAEKYQTVIADICRKMGCGMAEFLVKQVTSEQEWDQYCHYVAGLVGIGLS
RLFSASELEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQEGREFWPQEIWSKYVKKLS
DFTKPENIDLAVQCLNELITSALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACY
NNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYIEEIYHRIPDSDSSSDKTRQIIS
TIRTQKLPSCQLISERSHYSPIYLSFVMLLAALSWQYLSTLSQATEDYVQTGEH
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagccgcctgcggcatcaaggccatgtccctcttcaagcggaccttggtgctg
agccccaccgctgcgcccagggtcacgagcactggcatctccccgcgaggctgctcactg
cctcccgccacctggccctccaaggactggccgcggggagagggcgtctgccgtaggctg
tggagcccgacggctgccggccatttgccccaatcccactcttgctcctctacgtctccc
acctccgcgtgtcttctctgccctcaggattcgctcagcagcagcttgaaaacttgttac
aagtatctgcgtcagactagtcgcagtttcgcagctgttatccaggcgctggatggggaa
atgcgcaatgcagtatgcatattttatctggttctccgagctctggacactctggaagat
gacatgaccatcaatctagaagtaaaggtcccaatgttacaaaactttcactcttacctt
tatgaacccaactggtgcttcatggagagcaaagagagggatcgacaagtgctggaggat
ttcccaacgatctcttttgagtttagaaatctggccgagaaatatcaaacagtgattgct
gacatttgccgaaaaatgggatgtgggatggcggagtttttggttaagcaagtgacatct
gaacaggaatgggaccagtactgtcactatgttgctgggctggtaggaattggcctttcc
cgactgttctcagcctcagagttagaagaccccttagttggtgaagacacagagcgtgcc
aactctatgggcctgtttctgcagaaaacaaacatcattcgtgattatctggaagatcag
caagaaggaagagagttttggcctcaagagatttggagcaagtatgttaagaagttgagt
gattttactaagccagagaatattgacttagctgtgcagtgtctgaatgaacttataacc
agtgcactacaccacatcccagatgtcatcacctacctatccagacttagaaaccaaagt
gtgtttaacttctgcgctattccacaggtaatggccattgctactttggctgcctgttat
aataatcagcaggtgttcaaaggagtagtgaagattcgaaaaggacaagcggtaacccta
atgatggatgccaccaatatgccagctgtcaaagctataatacaccagtatatagaagag
atttatcatagaatccccgactcagactcatcttccgataaaacaaggcagatcatctcc
acaatcaggacacagaagcttcccagttgtcagctgatctctgagcgaagccactactcc
cccatttacctgtcgtttgtcatgctcttggctgccctgagctggcagtatctgagcact
ctgtcccaggccacagaagactatgttcaaactggagaacactga
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