Pteropus vampyrus (Indian flying fox): 120613943
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Entry
120613943 CDS
T07511
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgig03000
]
120613943 (SOX30)
Transcription factors [BR:
pgig03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120613943 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
120613943
NCBI-ProteinID:
XP_039732492
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MERARPEPPPQPRQLPRATPPRPLRPAPPPLSVEGTPFRAAAFEPPVSPPALCAAAIAAV
ASSCGEAAASSVQPSARRLLQVKPEQVLLLPPGPPLPQARDEGAVASPAQARLLQLRPEL
LLLPPPPPTSEGPPCRPELHPMQPRALHVKAEKQEPGHCFDSSVGLRRAVEVGPRTSRAA
KVEGLGPALDSRRGDEKKGKLEAEDVMRNAAKGGEGKSLSAIREGIIKTEEPERLREDCR
LGPETTSNGLVHGSKEVILAQPTSAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELIR
LAKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFM
VWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWV
YQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPSLQNTITHPVGEA
PPDIQLPTPAVQRPSPITLFQPSVSSTAQVAVQAPNLPLRPALPTQRFAGPSQTDTHRLH
SGANRSVKRPTPVSLESTNRIPTSASTAHARFATSTIPPPKEYPSVSTCPRSAPIPQAPP
IPHSHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSM
PECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCESMDGTSYYNNHSHSGE
EYLNPMPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccgccacctcagcctcgccaactgccgcgggcgactccg
ccgcgcccactgcgcccagctccgcccccactgtcggtcgagggcaccccctttcgggca
gcagccttcgagccccctgtgtcgccgcctgctctgtgcgcggccgccattgcggccgtg
gcctcgtcgtgcggggaggctgcggcgtcgagcgtacagccgtcggcacggcggctgcta
caggtgaagccggagcaggtgttgctactgccgccagggccaccactgcctcaggcccgg
gacgaaggcgctgtcgcctcgcccgcgcaggcgcggctgctgcagctgaggcccgagctg
ctgctgctgccgcccccgccgcccacgtcggagggccccccttgcaggcccgagttgcat
ccgatgcagccccgggcgctgcacgtcaaggctgaaaagcaggaaccaggccactgcttt
gattcttccgtggggcttcggagggcagtcgaagtggggcctaggacctcaagggcggcc
aaggtggaaggcctggggccggccctcgacagtcgccgaggggacgagaagaaaggcaaa
ttagaggcggaggatgtcatgaggaacgcggcgaaaggcggggaaggcaaaagcctgtcg
gccatcagagaaggaatcatcaaaacggaggaacccgagagactccgcgaggactgtaga
ctcggccccgaaaccacctctaatgggctggtccatggcagcaaggaggtcatcctggcc
cagccgaccagcgcctttgggccgcaccagcaagacctcagaatccctttgactctccac
acggtcccccctggggcccggatccagtttcagggacctccaccttcagagctgataaga
ttggccaaggtccccttgacaccagtgcctattaaaatgcaatcgttactggagccttct
gtaaaaatcgaaaccaaagatgtcccgctcaccgtgcttccctccgatgcaggaatacca
gacactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatg
gtttgggcaaggatccaccggccagcactagccaaagctaacccagcagccaacaatgca
gaaatcagtgtccagctcgggttagagtggaacaaacttagtgaagaacagaaaaaacct
tattatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcctggttgggtt
tatcaacctcgaccagggaagcgaaaacgcttccctctaagtgtttccaatgtattttct
ggtaccacacagaatatcatctctacaaatcctacaacaatttatccttatcgctcacct
acctactctgtggtaattcccagcctacagaacaccatcactcatccagttggcgaagcc
ccacctgacatccagctgcccacacctgcagtccagcgcccaagccctatcacacttttt
cagcccagcgtctccagtactgcccaggtggccgtccaggctccaaatctgcccctccgc
ccagcactccccacccagcgctttgctgggccctcccaaacggacactcatcggctgcat
tccggagccaatcgctctgtgaagagacccacacctgtctctctggagagcaccaacagg
attccaactagtgcaagtactgcccatgccagatttgcaacctcaaccatcccacctccc
aaggagtatcccagcgtttccacttgtcccagaagtgctccaatcccccaggctcctcct
attccacactcacatgtctaccagccccctccccttggccatccagccacgctgtttggg
accccaccgcgattctcttttcatcacccttacttccttcctggacctcactactttcca
tcaagcacgtgcccttatagtcggcctccttttggctatggaaattttccaagttcaatg
ccagaatgccttggttattatgaagacaggtaccaaaaacatgaggctatgttttcagct
ttaaatagagactatccttttagagactacccagatgaacgcacacacagtgaagattct
cggagctgtgagagcatggatgggacctcttactataacaaccatagccacagtggggaa
gaatacctaaatcccatgccacagctggacattggagccttggagaacgtcttcacagcc
ccgacgtcaactccctctagcatccagcaagtcaatgtcactgatagtgatgaggaggaa
gaagaaaaagtgctcaggaatttataa
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