Pteropus vampyrus (Indian flying fox): 120614596
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Entry
120614596 CDS
T07511
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03013
Nucleocytoplasmic transport
pgig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120614596 (UPF2)
03015 mRNA surveillance pathway
120614596 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120614596 (UPF2)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120614596 (UPF2)
mRNA cycle factors
P-body specific factors
120614596 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
120614596
NCBI-ProteinID:
XP_039733303
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MPAERKKPASMEEKESLLNNKEKDCSERRPVSSREKPKEEIKLTAKKEVIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEERKKQEEQAKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRSRNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLTFPPSEIVSPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKESNKDDSKAEAKDTKDNKEVSNPDDLELELENLEINDDALELEGADEA
EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLY
KDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
VNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLE
VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSK
DSITEGENLEEDEEDEEGGAETEEQSGNESEVNEQEEEDGSDNDEDEGEEEEEENTDYLT
DSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
AIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
ADLIFKTGGRRR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaatctttgctaaacaac
aaggaaaaagactgcagtgaaaggcggccagtgagcagcagggagaaaccaaaagaggag
atcaagctcactgccaagaaggaggttattaaggtccctgaagataaaaagaagaaactg
gaagaagataagagaaaaaaagaagacaaggaacgcaagaaaaaagaagaagaaaaggtg
aaggcagaggaggaattaaagaaaaaagaggaagaagaaaaaaagaaacatgaggaggaa
gagagaaagaagcaggaagagcaggcgaaacgacagcaagaagaagaagctgcccagttg
aaagagaaggaagaatcccttcagcttcatcaggaagcttgggaacgacatcagttaagg
aaagaacttcgtagcagaaaccaaaatgctccagacagtcgaccagaggaaaatttcttt
agccgactcgactcaagtttgaagaaaaatactgcttttgtcaagaaactaaaaactatt
acggaacaacagagagactccttgtcccacgattttaatggcctaaatttaagcaaatac
attgccgaagctgtagcttctattgtggaagcaaagctaaaaatatctgatgtgaattgt
gctgtgcacttatgctctctctttcaccagcgatatgccgactttgccccatcacttctt
caggtttggaaaaaacattttgaagcaaggaaagaagagaaaacacctaacattaccaag
ttaagaactgatttacgcttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctttctttaatctatgaacagctaaaaaatattattaatgccgatcgggaatcc
catactcatgtttctgtggtgattagtttttgtcgacattgtggagatgatattgctgga
cttgtaccaaggaaagtaaagagtgctgcagagaaatttaatttgacttttcctcctagt
gagatagttagtccagagaaacagcaacctttccagaatcttttaaaagaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacagaatactgagagacaaaac
aggcgtattctacattctaaaggggagctaagtgaagatagacataaacagtatgaggaa
tttgctatgtcttatcagaagctgctggcaaattctcaatccttagcggaccttttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagagcatgggcctggaatt
gatatatttacacctggtaaacctggagaatatgacttggaaggtggtatatgggaagat
gaagatgctcggaatttttatgagaacctcattgatctgaaagcttttgttccagccatc
ttgtttaaagataatgaaaaaagttgtcagaataaagagtccaacaaagatgattccaaa
gcagaggcaaaagacactaaggataataaggaggtatcaaatcccgacgatttggaactt
gaattggaaaacctagaaattaatgatgatgccttggagttagagggtgcagatgaagct
gaagatcttacaaagaaacttcttgacgagcaagaacaagaggatgaagaagccagtact
ggatctcatctcaagctcatagtagatgctttcctccagcaattgcccaactgtgtcaac
cgagatctgatagacaaggcagcaatggatttttgcatgaacatgaacaccaaagcaaat
aggaagaagctggtacgggcactctttatagttcccagacaaaggttggatttgctacca
ttttatgcaagattggttgctacattacatccgtgcatgtctgatgtagcagaggatctt
tgttccatgctgagaggggatttcagatttcatgtacgaaaaaaggaccagatcaatatt
gaaacaaagaacaaaaccgttcgttttattggagaactaactaagtttaagatgttcaca
aaaaatgatacattacattgtttaaagatgcttctatcagacttttcccatcaccatatt
gaaatggcatgtaccctactggaaacatgtggaagatttcttttcagatctccagaatct
cacttgaggaccagtgtacttttggaacaaatgatgagaaagaaacaagcaatgcatctc
gatgcaagatatgtcacaatggtagagaatgcatattactactgcaacccacctccagct
gaaaaaacagtgaaaaagaaacgacctcctctccaggaatatgtacggaaacttttgtac
aaggatctctccaaggttaccactgaaaaggttttgagacagatgcgaaagttgccctgg
caggaccaagaagtgaaagactacgtaatttgttgtatgataaacatctggaatgtgaaa
tataatagtattcattgtgtagccaacctcttagcaggactagtgctctaccaagaagat
gttggaatccatgttgtggatggagttttagaagatattcggttaggaatggaggttaat
caacctaaatttaatcagagacgtatcagcagtgccaagttcttaggagaactttataat
taccgaatggtggaatcggctgttatttttagaactctttattctttcacttcatttggc
gtcaaccctgatggctctccaagttcactggaccctcctgagcaccttttcagaattaga
ttagtatgcactattttggatacctgtggccagtactttgacagaggttccagtaaacga
aaacttgattgcttccttgtgtattttcagcgttatgtttggtggaagaaaagtttggag
gtttggacaaaagaccatccatttcctattgacatagattacatgatcagtgatacacta
gaactgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggta
caagacttggaacgagaattcttaataaaactaggcctagtaaatgacaaagattcgaaa
gattctataacagaaggagaaaatcttgaagaagatgaagaagacgaagaaggaggagct
gaaacagaagaacaatctggaaatgaaagtgaagtaaatgaacaagaagaagaggatggt
tctgataatgatgaggatgaaggagaggaagaagaggaagagaatacagattaccttaca
gattcaaataaggagaatgaaactgatgaagaaaatactgaggtaatgatcaaaggaggt
gggcttaagcatgtaccttgtgtagaagatgaggacttcattcaagctctggataaaatg
atgctagaaaatcttcagcaacgaagtggcgaatctgttaaagtacaccaacttgatgtc
gctattcctttgcatctcaaaagccagctaaggaaagggcccccactcggtggtggggaa
ggagaggccgagtctgcagatacaatgccatttgtcatgttaacaagaaaaggcaataaa
cagcagtttaagattcttaatgtgcccatgtcttcccaacttgctgcaaatcattggaac
cagcaacaggcagaacaagaagagaggatgaggatgaaaaagctcacattagatatcaat
gaacggcaagaacaggaagattatcaagaaatgctgcagtctcttgcccagcgcccagct
ccggcaaataccaatcgggagcggcggccgcgataccagcatccaaagggagcgcctaat
gcggatctaatctttaagactggtgggaggagacgttga
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integrated database retrieval system
