Pteropus vampyrus (Indian flying fox): 120615565
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Entry
120615565 CDS
T07511
Symbol
SHANK1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
120615565 (SHANK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
120615565
NCBI-ProteinID:
XP_039734638
LinkDB
All DBs
Position
Unknown
AA seq
2087 aa
AA seq
DB search
MTRSPASSEDEEHHSASECPEGGSESDSSPDGPGRGLRGTRGRGSGAPGSLASARGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGASKDVKNNNGQTAFQVAVIAGNFELGELIRNHREQDTVPFQESPKYAARR
RGPPSAGLTVPPALLRANSDTSMALPDWMVFAAPGTSSAGAPGPIPGPQGQSQPSAPSTK
LSTGTLRSASSPRGARARSPSRGRHPDEAKRQPRGRPSSSGTPREGPTGGTGGSAGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIDSAPDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
AISLRSKSMTSELEEMEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPA
VGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIGAAEDDRPY
LAPPTMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPAAPSSSGRLTPTGGSPDDPPPRLA
LGPQPSLRGWRGGGPGAPPGAPSASHHGGPAQAPALRYFQLPPRAASAAMYVPARSGRGR
KGPLVKQTKVEGEPQKGGGLPPASPASPASPQPPPAAAAASEKNSIPIPTIIIKAPSTSS
SGRSSQGSSTEAEPPTQPDAAGGSSAPSPAPAVSPAPPSPSPAPAPASPSGPATLDFTSQ
FGAALVGAARREGGWQNEARRRSTLFLSTDAGDDEAGGGGGGGGGAGGGGALGPGAPPGP
RLRHSKSIDEGMFSAEPYLRLESAGAGGGGGGAYGGYGAASRAYGAGGGASSAFTSFLPP
RPLVHPLTGKALDPASPLGLALAARERALKESSEGGGAPQPPPRPPSPRYEAPPPTPQHH
SPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQDRSLPASPPAARRSLLHRLPPTAPGV
GPLLLQLGPEPPAPHPGVSKAWRPGAPEEPERLPLHVRFLENCQSRAGGAGARGPPPEDG
PGAPPPSPRRSVPTSPTSPRGSEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSN
SFEKPESPLTPGPPTLLPDPPPHXPPAAPGAAPHKARLQPSTLRLTTDLTPHDSPVAACD
QGAPVAPGDAPPPGPPAPAAPAPAAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSAS
TLSSLSAEGGGSAGGGGGAGGASVASGPELLDTYVAYLDGQAFGGSGAPGPPYPPQLMTP
SKLRGRALGASGGLRPSPSGGLRDPVTPTSPTVSVTGAGTDGLLALSGCSGPSAAGVPGG
PVAVEPEGPPVPLPSATSLPRKLLPWEEGPGPPPPPLPGPLAQPQASALATVKASIISEL
SSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGGASYVPERTSSLQRQRLSDDSQSSLLS
KPVSSLFQNWPKPPLPPLPTGTGVPPSAAAAPGATSPSASSSSTSTRHLQGVEFEMRPPL
LRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGLFDMRSSPTGGAGGSADPFAPVF
VPPHPGMSGGLGGALSGASRSLSPTRLLSLPADKPFGAKPLGFWTKFDVADWLEWLGLAE
HRARFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALRFFLER
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcagccccgcctcaagcgaggacgaggaacaccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccgggagaggcctccggggcacc
cggggccggggcagtggggcgcctggtagcctggcctccgcgcgaggcctgcagggccgc
tccatgtctgtccccgacgacgcccacttcagcatgatggtcttcaggattggcattccg
gacttgcaccagacaaaatgcctgcgcttcaaccctgatgccaccatctggacagccaag
cagcaggtgctctgtgccctgagcgagagtctgcaggacgtgctcaactacggcctgttc
cagccagccacctccggccgcgacgccaacttcctggaggaggagcggctgctgcgagag
tacccccagtccttcgagaagggggtgccctacctggagttccggtacaagacccgagtt
tacaaacagaccaacctggatgagaagcagctggccaaattgcacaccaagaccgggctg
aagaaattcctggagtacgtgcagcttgggacgtctgacaaggtggccaggctgctggac
aaggggctggaccccaattatcatgactcggattcaggagagacccccctgacgctggcc
gcccagacggaaggctccgtagaggtgattcgaacgctgtgcttgggtggagcccacatc
gacttccgggcccgagacggcatgacagccttgcacaaggccgcgtgtgcccggcactgt
ctcgctcttacggcactcctggaccttgggggctcccccaactacaaggaccgccggggg
ctgacccctctgttccacacggctatggtggggggcgacccccgctgctgtgagctgctt
ctgtacaacagggcccagctgggcatagccgatgagaacggctggcaggagatccaccag
gcctgccagcggggtcactcccagcatctggaacacctgctcttctacggggctgagccc
ggagcccagaacgcctcggggaacacggccctgcacatctgcgctctctacaataaggag
acttgtgctaggatcctcctgtaccgaggggccagcaaggacgtgaagaataacaatgga
cagaccgccttccaggtggcagtgatcgccgggaatttcgagctgggggaattaatccga
aaccatcgagaacaggacaccgtacccttccaggagtcccccaagtatgccgcccggcga
cgggggccccccagcgccgggctgaccgtgccccccgcgctgctgcgggccaacagtgac
accagcatggccctgcccgactggatggtgttcgccgccccggggacttcgtctgccggg
gcccctggccccatcccggggccccaaggccagtctcagccctcggcccccagcaccaag
ctcagcaccgggaccctccgaagtgccagcagccctcggggtgcccgggcccgctccccg
tcccgagggaggcaccccgacgaggccaagaggcagccccgcggacggcccagctccagc
gggacgccgcgggaagggcccaccgggggcaccggcggctcagcggggcccggcggctcc
ctgggcagtcgtgggaggcgccggaagctctactccgcggtgcccggacgctccttcatg
gcggtgaagtcctaccaggcccaggccgagggggagatctccctgagcaagggggagaag
atcaaagtgcttagcatcggggaaggcggcttctgggaaggccaggtcaaaggtcgcgtc
ggctggttcccctcggactgcctggaagaggtggcgaaccgttcgcaggagggaaagcaa
gaaagccgcagtgacaaggcaaagaggctcttccggcactacaccgtgggctcctacgac
agcttcgatgccccaagcttgatggatgggattgactctgcaccggattacatcattaag
gagaagacggtcctactgcagaagaaagacagcgaggggtttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccccaccccggccttcccggccctgcag
tacctggagtcggtggacgagggcggtgtggcctggcgggcaggactgcggatgggggac
ttcctcatcgaggtgaacgggcagaatgtggtgaaggtcggccaccggcaggtggtaaac
atgattcggcaagggggcaacacactgatggtcaaggtggtgatggtcaccaggcacccg
gacatggacgaggccgtccacaagaaagcaccccagcaggctaagcggctcccgcccccg
gccatctcgctgcgatccaagtctatgacctcagagctggaggagatggagtacgagcag
cagccggcgccggtgcccagcatggagaaaaagcggacggtgtaccagatggcgctcaac
aaactggacgagatcctggcggccgctcagcagaccatcagcgccagcgagagtcctgca
gtggggggcctcgcgtccctgggcaaacaccgccccaaaggattctttgccaccgagtcg
agcttcgatccccaccaccgctcacagccaagttacgagcgtccttcttacctgcctcca
ggacctgggctcatgctccggcagaaatcgatcggggccgcagaagacgataggccttac
ctagcacccccaaccatgaagttcagccgcagcctgtcggtgcccggctccgaggacatc
cctccgcctcccaccacgtccccgccggagcccccctacagcacgcctgcggccccttcc
tcctccggccgcctcacccccacgggcggctcccccgacgaccccccgccgcggctggcc
ctggggccccagcccagcctccgcggctggcggggcggcgggcccggcgcgccccccggg
gccccgtcggcgtcgcaccacggcggccccgcccaggcccccgccctgcgctacttccag
ctgcccccgcgggcggccagcgcggccatgtacgtgcccgcgcgctcgggccgcgggcgc
aagggcccgctggtcaagcagaccaaagtggagggcgagccgcagaagggcggcggcctc
ccgcccgcgtcgcccgcgtcgcccgcgtccccgcagccgccgccggccgcggccgccgcg
tcggagaagaactccatccccatccccaccatcatcatcaaggccccgtccaccagcagc
agcggccgcagcagccagggcagcagcaccgaggccgagcccccgacccagcccgacgcg
gcgggcggctcctccgcgccgagccccgccccggccgtgtcgcccgcgccgccgtccccg
tcgcccgcgcccgcgcccgcctcgcccagcggcccggccacgctggacttcaccagccag
ttcggagcggcgctggtgggcgcggcgcgcagagagggcggctggcagaacgaggcgcgc
cggcggtccacgctcttcctctccaccgacgccggcgacgacgaggccggcggtggcggt
ggcggtggcggcggcgccggcggcggcggcgcgctgggccccggggcgccccccggcccg
cggctgcgccactccaagtccatcgacgaaggcatgttctccgcggagccctacctgcgg
ctggagtccgcgggcgcgggcggcggcggcggcggcgcctacgggggctacggggccgcc
agccgcgcctacggggccggcggcggggccagcagcgccttcaccagcttcctgccgccg
cggcccctggtccacccgctgaccggcaaggccctggacccagcctccccgctcgggctg
gccctggcggcgcgcgagcgggcgctgaaggagtcctcggagggcgggggcgccccccag
ccccctcccaggcccccatcgccccgctacgaggccccgccgcccaccccgcaacaccac
tcgccccacgcccaccacgagccagtgctgcgcctctggggggcctccccgcccgacccc
gcccgccgggagctggggtaccgggcaggcctgggcagccaggacaggtcgcttccggcc
agcccgccagctgcccggcgctccttgctgcaccgcctgccccccaccgctcccggcgtc
gggcccctcctgctgcagctggggcccgagccccccgccccgcaccctggggtgagcaag
gcctggaggcccggggcccccgaggaacctgagcggctgccgctgcacgtgcggttcctg
gagaactgccagtcccgggccggcggcgcgggcgcaaggggtcctccgccggaggatggg
ccgggggccccgccgcccagcccgcgccgatccgtgcccacgtcacccacctccccgcgg
ggcagcgaggagaacgggcttcctctgctggtcctgccgcctccggctccctcggtggac
gtggaagacggcgaattcctctttgtggagcctctgccgccgcccctggagttctccaac
agcttcgagaagcccgagtcgcccctcacgccggggccccccacccttctgccagacccc
ccaccccactgaccacccgctgcccccggcgccgccccccataaagctcggctgcagcct
tccaccctgagactcacgactgacctgacacctcacgacagcccagtggctgcgtgtgac
cagggggcccccgtggctcctggggacgcccctccaccaggcccaccggcccccgccgcc
cctgcacccgcagccccacagcctggcccagaccctccgcctggcacggattcgggcatc
gaggaggtggacagtcggagcagtagtgaccacccgctggagaccatcagcagcgcctcc
acgctgagcagcctgtctgccgaaggcggaggcagcgcagggggtggcggcggtgctggc
ggagcgagtgtggccagtgggccagagctgctggacacgtatgtggcctacctggacggc
caggccttcgggggcagcggtgcccccggcccgccgtaccctccccagctcatgactccc
tctaagctccggggccgggcgctgggggccagcggaggcctgcgccccagccccagtggg
ggacttcgagaccctgtcactcccaccagccccacggtctcagtgacaggggccggaacc
gatgggctgctggccctgagtggttgctcgggaccctcggcagcaggcgtccctgggggt
ccagtggccgtagagccggaaggcccaccagtgcccttgccatccgccacctctctgcct
cggaagctgctgccctgggaggagggcccgggccccccgccaccacccctgcccgggccc
ctggcccagcctcaggcctcagccttggccacagtaaaagccagcatcatcagtgaactc
agctccaagcttcagcagtttgggggctcctcagcagctgggggcgctctgccctgggcc
cggggaggcagcgggggcagcggggacagccaccacgggggagccagctacgtccctgag
aggacctcctctctgcagcggcagagactctcggatgactcccaatcctcgctcctctcc
aaacccgtcagcagcctgtttcagaactggcctaaaccacctctgccaccactccccaca
ggaacgggggtcccgccttcagctgctgcggccccgggggccacctcaccctcagcctcg
tcctcctccacgtccactcgccacctccagggtgtggagttcgagatgcggccgcctctg
ctccgccgggcgcccagcccctcgctgctgcccgcctcggagcacaaggtcagccccgcg
ccccggccctcgtccctgcccatcctgccttccggacccctctacccgggcctctttgac
atgcgcagctcgcccacgggaggggccggaggctcggctgaccccttcgctccggtcttt
gtgccgccgcacccgggcatgtccggggggcttggcggagccttgtcgggggcctcccgc
tccctgtcgcccacccgcctgctgtcgctgcccgcggacaagccgtttggcgcgaaacct
ctgggcttctggaccaagttcgacgtggctgattggctggagtggctgggcttggctgag
caccgagcccgcttcctggaccacgagatcgacggctcccacctgcccgccctgaccaag
gaggactacgtggacctgggtgtgaccagggtgggccaccgcatgaacatcgaccgcgcg
ctcagattcttcctggagaggtga
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