KEGG   Pteropus vampyrus (Indian flying fox): 120616100
Entry
120616100         CDS       T07511                                 
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
pgig  Pteropus vampyrus (Indian flying fox)
Pathway
pgig05014  Amyotrophic lateral sclerosis
pgig05017  Spinocerebellar ataxia
pgig05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:pgig00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    120616100 (ATXN2)
   05017 Spinocerebellar ataxia
    120616100 (ATXN2)
   05022 Pathways of neurodegeneration - multiple diseases
    120616100 (ATXN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgig03019]
    120616100 (ATXN2)
Messenger RNA biogenesis [BR:pgig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120616100 (ATXN2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 120616100
NCBI-ProteinID: XP_039735381
LinkDB
Position
Unknown
AA seq 1161 aa
MSLKPQQQQQQQQQQQQQQQQQQAPPPAAASARKPGGGGGGGLLTSPVAAPSPSPSSPSV
SSSAAASSSSAATASASGGRPGLGRGRNNSKGLPQSTISFDGIYANMRMVHILTSVVGSK
CEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQ
FKDMDSSYARRVPSETDAFTDSAISAKVNGEHKEKDLEPWDAGELTTSEELEALENDVSN
GWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQY
KARVALENDDRSEEEKYTAVQRNSSEREGHNINTRENKYIPPGQRNREVISWGSGRQNSP
RMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSL
PPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNH
RVSAGRGSISSGLEFVSHTPPSEAAAPPTARTSPAGGTWSSVVSGVPRLSPKTHRPRSPR
QNSIGNTPSGPVLASPQAGIIPTEAVAMPLPAASPTPASPASNRAVTPSIEAKDPRLQDQ
RQNSPAGNKENMKPNETSPSFSKAENKGISPIVSEHRKQIDDLKKFKNDFRLQPSSTSES
MDQLLNKNREGEKSRDLIKDKIEPNAKDSFIENSSSNCTSGSSKPNSPSISPSILSNTEH
KRGPEVTSQGVQTSSPGCKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTT
PTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQA
KTYRAGKVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLV
QHVPHYQSQHPHVYSPVIQGNARMMAPPAHAQPGLVSSSATQYGAHEQTHAMYACPKLPY
NKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGNHPAPSPVQ
HHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSH
VQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVS
TTAHFPYMTHPSVQAHHQQQL
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgtcgctgaagccccagcagcagcagcagcagcagcagcaacagcagcagcagcagcag
cagcagcaggcgccgccgcccgcggccgccagtgctcgcaagcccggtggcggcggcggc
ggcggccttctcacgtcgccagttgccgcgccgtcgccgtcgccgtcctcgccctcagtc
tcgtcctcggccgcggcttcctcgtcctccgcggcgacggcgagcgcaagcggtgggcgg
cccggcctgggcagaggtcgaaacaatagcaaaggactgcctcagtctacgatttctttc
gatgggatctatgcaaatatgaggatggttcatatacttacatcagttgttggatccaaa
tgtgaagtacaagtgaaaaacggaggtatatatgaaggagtttttaaaacgtacagtcct
aagtgtgatttggtacttgatgctgcacatgagaaaagtacagaatcaagttcagggcca
aaacgtgaagaaataatggagagtattttgttcaagtgttcagacttcgttgtggtacag
tttaaagatatggactccagttatgcaagaagagttccttcagaaacagatgcttttact
gactctgctatcagtgctaaagtgaatggtgaacacaaagagaaggacctggagccctgg
gatgctggtgaactcactaccagtgaggaactggaagctttggaaaatgatgtctctaat
ggatgggatcccaacgatatgtttcgatataatgaagaaaattatggtgtagtgtctaca
tatgatagcagtttatcttcatatacggtgcccttggaaagggataattcggaagaattt
ttaaaacgagaagcaagagcaaaccaattagcagaagaaatcgaatcaagtgcccagtac
aaagcccgggtggccctagaaaatgatgataggagcgaagaagaaaaatacacagcagtt
cagagaaattccagtgaacgtgagggccacaacataaacactagggaaaataaatatatt
cctcctggacaaagaaatagagaagtcatatcctggggaagtgggagacagaattcaccg
cgtatgggccagcctggatcgggctccatgccgtcaagatccacctctcacacttcagat
ttcaacccgaattctggttcagaccaaagagtagttaatggaggtgttccctggccatcg
ccttgcccatctccttcctctcgcccaccttctcgctaccagtcaggtcccaactctctt
ccacctcgggcagccacccctacacggccgccctccaggcccccctcgcggccatccaga
cccccgtctcacccctctgctcatggttctccagctcctgtctctactatgcctaaacgc
atgtcttcagaagggcctccaaggatgtccccaaaggctcagcgacaccctcgaaatcac
agagtttctgctgggaggggttccatttccagtggcctagaatttgtatcccatacccca
ccaagtgaagcagctgctcctccaacagcaaggaccagccccgcagggggcacgtggtca
tcagtggtcagtggggttccaagattatcccctaaaactcacagacctaggtctcccaga
caaaacagtattggaaatactcctagtggaccagttcttgcttctccccaagctggtatt
attccaactgaagctgttgcgatgcctcttccagctgcatctcctacgcctgccagtcct
gcatccaacagagctgttactccatctattgaggctaaggatcccaggcttcaagatcag
aggcagaattctccggcagggaataaagaaaatatgaagcccaatgagacatcacctagc
ttctcaaaagctgaaaataaaggtatatcacccattgtttctgagcatagaaaacagatt
gatgacttaaagaaatttaagaatgattttaggttacagccgagttctacttctgaatct
atggatcaactgctaaacaaaaatagagagggagaaaaatcaagagatttgatcaaagac
aaaattgaaccaaatgccaaggattctttcattgaaaatagcagcagcaattgcaccagt
ggcagcagcaagccgaatagccccagcatttccccctcaatcctcagtaacacggagcac
aagaggggacctgaagtcacatcccaaggggttcagacttccagtccaggatgtaaacaa
gagaaagatgataaagaggagaagaaagacgcagctgagcaagtaaggaaatcaacattg
aatcccaatgcaaaggagttcaaccctcgttctttttctcagccaaagccttctaccacc
ccaacttcgcctcgtcctcaagcacaacctagcccatctatggtgggtcatcagcagcca
actccagtttatactcagcctgtttgttttgcaccaaatatgatgtatccagtcccagtg
agcccaggcgtgcaacctttatatcctatacctatgacgcccatgccagtgaatcaagcc
aagacatatagagcaggtaaagtaccaaatatgccccaacagcgacaagaccagcatcat
cagagcactatgatgcacccagcctcagcagcaggcccaccaatcgtggccaccccacca
gcttattccacacaatacgttgcctatagtcctcagcagtttccaaatcagcctcttgtt
cagcacgtgccacattatcagtctcagcatcctcatgtctatagtcctgtaatacagggt
aatgctaggatgatggcaccaccagcacatgcccagcctggtttagtatcctcttcagca
actcagtacggggctcatgagcagacacatgcaatgtatgcatgtcccaaattaccatac
aacaaggagacaagcccttctttctactttgccatttccactggttcccttgctcagcag
tacgcacaccctaatgctaccctgcacccacatacgccacatcctcagccttcagctacc
cctaccggacagcagcaaagccagcatggtggaaatcaccctgcacccagccctgttcag
caccatcagcaccaggccgcccaggctctccatctggccagtccacagcagcagtcagcc
atttaccacgcggggcttgcaccaacccctccttccatgacacctgcctccaatacgcag
tcgccacagaatagtttcccaacagcacaacagaccgtctttacaattcatccttctcat
gttcagccggcatataccaatccaccccacatggcccacgtacctcaggctcatgtacag
tcaggaatggttccttctcatccaactgcccatgcgccaatgatgctaatgacgacacag
ccacccggcggtccccaggccgccctcgctcaaagtgcactacagcccattccagtctcg
acaacagcgcatttcccctatatgacgcacccttcagtacaagcccaccaccaacagcag
ttgtaa

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