Pteropus vampyrus (Indian flying fox): 120616365
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Entry
120616365 CDS
T07511
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig04151
PI3K-Akt signaling pathway
pgig04382
Cornified envelope formation
pgig04510
Focal adhesion
pgig04512
ECM-receptor interaction
pgig04820
Cytoskeleton in muscle cells
pgig04926
Relaxin signaling pathway
pgig04933
AGE-RAGE signaling pathway in diabetic complications
pgig04974
Protein digestion and absorption
pgig05146
Amoebiasis
pgig05165
Human papillomavirus infection
pgig05200
Pathways in cancer
pgig05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
120616365 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120616365 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120616365 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120616365 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
120616365 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
120616365 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
120616365 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
120616365 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
120616365 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
120616365 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
120616365 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
120616365 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgig04147
]
120616365 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
pgig00536
]
120616365 (COL4A5)
Exosome [BR:
pgig04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120616365 (COL4A5)
Glycosaminoglycan binding proteins [BR:
pgig00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120616365 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120616365
NCBI-ProteinID:
XP_039735633
LinkDB
All DBs
Position
Unknown
AA seq
1605 aa
AA seq
DB search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NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagttggcctggctgccggcttgttcttactggccctgagagttcgg
tggcagcctgcagaggctgcggcttgctatgggtgttctccaggatcaaagtgtgactgc
agtgctgtaaaaggagaaaagggggagagaggatttccaggtttggaaggccatccaggt
ttgcctggatttccaggtccagaagggcctccagggccttggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggacttcccggaatgccaggacatgatggggccccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggaagtcccggttttcct
ggtttacagggtcctccaggacctcctgggattccaggtatgaagggagaacaaggtagt
ataattatgtcatcactgccaggaccaaagggtaatccaggatatccaggtcctcctgga
atacaaggcccagctggtcccgctggtatgccagggccagttggtcctccaggaccacca
ggtttgatgggcccacctggtccaccagggcttccaggaccaaaggggaatatgggctta
aatttccaaggacccaaaggtgaaaagggcgagcaaggtcttcagggccctcctgggcca
cctgggcagatcagtgaacagaaaagaccaatcgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgggggcctcctggacctccagggttgcgtggtcctccaggtctt
ccaggtggtgcgaaaggtgagaagggtgagcaaggagagcctggcaaaagaggtaaaccg
ggcaaagatggagagaatggccaaccaggaactccaggtttgcctggtgatcctggttac
cctggtgaaccaggaaaggttggagaaaagggccaaaaaggtgacataggctcaattggc
ccccctggacttgtaattcctagacctgggactggtgtaaccgtaggagaaaagggaaat
attgggttacctggcttgcctggagaaaaaggagagcgaggatttcctggaatacagggt
ctacctggccttcctggacctccagggattgctgttatgggtccccctggcccccctggc
tttcctggagaaaggggccaaaaaggtgatgaaggtccaccaggaatttccattcctgga
tctcctggacttgatggacagcaggggtctcctggacttccagggcctcctggccctcca
ggccctcaaatccctcctagtgataagatatgtgaagcaggccctccaggccctccagga
tctccaggtgacagaggactccaaggagaacaaggagagaaaggtgacaaaggtgacacc
tgcttcaactgtattggaactggtatttcagggcctccaggtcaacgtggtttaccaggt
cttccgggtcctccaggatctcttggttttcctggccagaagggtgaaaaaggaaacact
ggtgcaactggtcccaaaggattaacaggcataccaggagctccaggtgctccaggcttt
cctggacctaaaggtgaacctggtgacatcctgacttttccaggaatgaagggtgacaaa
ggagagtttggtttccctggagctccaggactccctggtttacctggcacccctggacag
gatggattgccagggcttcctggccccaaaggagaacctggcggaattgcttttaagggt
gaaagaggtccccctgggaacccaggtttgccaggtctcccagggaatagggggcctatg
ggccctcttggtgttggccctccaggcccagtaggtgaaaaaggcatacaaggtgtgaca
ggaaatccaggccagccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
cagccagggaaacctggcctgcctggtatcccagggagagatggtgaagtaggtcttcca
ggtgaccctggactcccaggacagccaggcttgccaggaataccgggtagcaaaggagaa
ccaggtatccctggaattgggcttcctggaccaaaaggtgatgttgggccaaatggacaa
cctgggccagtgggacctcctgggcctccaggaataggtgttcagggaccaccagggcca
ccagggattcctggaccaataggccaacctggattgcatggaacaccaggagagaaggga
gatccagggcctcctgggtttgatgttccaggaccccctggtgaaagaggcagtccaggg
atccctggagcacctggtcctatgggacccccaggatcaccagggcttccaggaaaagca
ggtgcctctggctttccaggtgccaaaggtgaaatgggtatgatgggacctccaggtcca
ccaggacccttgggaattcctggcaggagtggtgttcctggtctcaaaggtgatgatggt
ttgcagggtaagccaggacctcctggtcctacaggagaaaaaggtggtaaaggagaacct
ggccttccaggccctcctggtccaatggatccagatctgctgggctcaaaaggcgagaaa
ggggaccctggtttaccaggtatccctggagtttcagggccaaaaggttatcagggtttg
cctggagacccagggcaacctggactgagtggacaacctggattaccaggaccaccaggt
cccaaaggtaaccctggtctccctggaaatccaggacttacaggacctcctggacttaaa
ggaaacataggtgatatgggttttccaggccctcagggtgtaaaggggtctcctggtact
cctggagttcctggacaacctggctccccaggactacctggacagaaaggagaaaaaggt
gatcctggtgtttcgggcattggtcttccaggtcttcctggcccaaagggtgaacctggt
ctgcctggatacccagggaaccctggtatgaaaggttctgtgggagatatcggtttgccc
ggattaccagggacccctggagcaaaaggacaatcaggccttcctggatttcctggaatc
ccaggccttcctggaccaaaaggtattaatggtcctcctgggaaccctggacttccagga
gaacctggtcctataggtgctggaggtcatcctgggccaccggggcctccaggtgaaaaa
ggcaaaccaggtcaagatggtattcctgggccagctggacagaagggtgaaccaggtcaa
ccaggctttggaatcccaggaccccctggactcccaggactttctggtcaaaagggtgat
ggaggattacctggcattccaggaaaccctggcctaccaggtccaaagggtgaaccaggc
tttcagggtttccctggtgtgcagggtcccccaggccctcctggttctccaggtccagct
ctggaaggccctaaaggcagtcctgggccccaaggtcctcctgggagaccaggtcctaca
ggttttcaaggtctaccaggtccagaaggtccccggggtctccctggaaatggaagtatt
aaaggagagagaggaaacccaggctcacccgggcagcctggtttgcctggtttgaaagga
gatcaaggaccacccggactccagggtaatcctggccggccaggtctcaatggaatgaaa
ggagatcctggtctccctggtgttccaggatttccaggcatgaaaggactcagtggagta
cctggttcaactggccctgagggggatccaggacctattggccccccaggtccccctgga
ttacctggtccttcaggacagagtattgtaatcaaaggagatgctggtcctccagggatc
ccaggccagcctggatttaaaggtctaccaggactaccaggacttcaaggattaccaggc
cctattggccctccaggagatcctggacgcaatggtctccctggctttgatggtgcaggg
gggcgcaaaggagaccccggtcttccaggccacccaggtacccgaggtatggatggtctc
cctgggccagatggtttgcaaggtcccccaggtcctcctggaacttcctctattgcccac
ggattcctcatcacacgtcacagccagacaacagattcaccacaatgcccgcagggaact
gtccagatttatgaaggcttttctctcctgtatgtacaaggaaataaaagagctcacgga
caagacttgggaacagccggcagctgccttcgtcgcttcagtaccatgcctttcatgttc
tgcaacatcaataatatttgtaactttgcttcaagaaatgactattcttactggctctcc
actccagagcccatgccaatgagcatggagcccctgaagggccagagcatccagccattc
ataagtcgatgtgctgtgtgtgaagctccagctgtggtgattgcagttcacagtcagacc
attcagattcctcattgtcctcagggatgggattctctctggattggttattcctttatg
atgcacacaagtgcaggggcagagggctcaggtcaagctctggcctcacctggttcctgc
ttggaagaatttcgttcagctccattcattgaatgccatgggcggggtacctgcaactac
tatgccaactcctacagcttttggctggcaaccgtagatgtgtcagacatgttcagcaaa
cctcagtcagaaacgctgaaggcaggagacttgaggacacgtattagccgatgtcaagtg
tgcatgaagaggacttaa
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