Pteropus vampyrus (Indian flying fox): 120616381
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Entry
120616381 CDS
T07511
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig04151
PI3K-Akt signaling pathway
pgig04510
Focal adhesion
pgig04512
ECM-receptor interaction
pgig04820
Cytoskeleton in muscle cells
pgig04926
Relaxin signaling pathway
pgig04933
AGE-RAGE signaling pathway in diabetic complications
pgig04974
Protein digestion and absorption
pgig05146
Amoebiasis
pgig05165
Human papillomavirus infection
pgig05200
Pathways in cancer
pgig05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
120616381 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120616381 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120616381 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120616381 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
120616381 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
120616381 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
120616381 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
120616381 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
120616381 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
120616381 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
120616381 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgig04147
]
120616381 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
pgig00536
]
120616381 (COL4A6)
Exosome [BR:
pgig04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120616381 (COL4A6)
Glycosaminoglycan binding proteins [BR:
pgig00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120616381 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120616381
NCBI-ProteinID:
XP_039735686
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search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NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctaggttgtggctgctcgttgttacgttgtgcctgaccgagaaacttgcagga
gcgggagagaagaaatcctatggaaagccatgtggaggccaagactgcagtgggggctgt
aaatgctttcctgagaaaggagcgagaggccaaccaggatcaattggaattcaaggtcca
tcaggtcctcaaggatttgttggccctagtggtttatcaggattgaaaggagaaaggggc
tccccaggccctctgggaccatatggaccaaaaggagataagggtcccatgggagttcct
ggctttcttggcatcaatgggattccgggccaccctggacagccagggtccagaggccca
cctggccaggatggctgtaatgggactcaaggagctgttggatttccaggccctgatggt
tttcctgggcttctcggatcacctgggcctcctggtcagaaaggatctaaaggtgaacct
gtctttgcccaaggtagtttcaaaggaatgaagggggatcctgggctgcctggattagat
ggaatcactggcccacgaggaatacccggctccccaggagctgtaggacccataggatca
ccaggattacaaggtcctccaggctttcttggtcttcctggtcttgacggaaatatgggg
ttaggtttccaaggagagaaaggagacaagggggatgttggcctccctggccctgcagga
cctccaccatctactggagaattggaatttatgggatttcccaaaggaaagaaaggatct
aagggggaaccagggcttcagggtttcccaggaacaagtggccctccaggtttcctggga
tttggaactgctggagaaaagggagaaaaaggaatccctggtttaccaggacctaggggt
ctcatgggtttagatggagtccaaggccctccagggagtcagggcaagaaggggtcctca
ggtttccccgggcttaatggactgccaggaattaagggtgaaaaaggtgacattggtttg
ccaggtccagatgttttcatcgatagagatggtgctgtgatctcaggttatcctggagac
cccggtatgccaggcctcccaggacctaaaggtgatgaaggtatccagggcccttctggc
tcttctggcatccctggcttaccagctttaccgggtgcgccaggtgccctagggccccaa
ggatatccaggcttgaaaggagacaaaggaaacccaggccgcaccacaattggggaagct
ggctttcctggcaaagatggtttgccaggtttaccaggcctgccaggcccacctggtctg
gcatttgagactggaaccctaaagaacacagagccagggttccttggtctccgaggagaa
cgaggtccaaaaggaaaccaaggtctcaaaggagttaaaggggattcaggtttttgtgct
tgtgatggtggtgtccctaacaatggaccacctggggatccaggcctgcctgggccacca
ggtcacataggcctgccaggccttaaaggaaccagaggagatccaggctttgggggccca
ccgggcccaccaggggctctaggtttatttgggcctcaaggtcctacaggtcccaaagga
aagaaaggggaaccaactttcagtacaagattagggatgccagggaaacagggtgatcct
ggcccccagggtctccctggtgatacaggagcaccaggcaaggatggaataccaggttta
ccaggtctgccaggtcttccgggtgatgatggacagggcttcccaggtgaaaaaggatta
cctggaatccctggtgaaaaaggccatagtggtctacctggcctcccaggaattgggcta
ccaggatctcctggacctcgtgggcttcctggagaccaaggaatacatggattgccaggg
aatcaaggcctccctgggcctccaggtatcaccttgccttgtattattcctgggtcgtat
ggtccaacaggattcccaggagctcctggattcccaggccctaaaggggcccatggcctc
cctgggactccaggccagcctggatcacatggaagtaaaggagagcctggaagtgtagga
ttggttcaccttcctgaattgccaggatttcctggacctcgtggggagatgggcttgcct
gggtttcctggactccctggaaaagatggcttgcctggcaacgttgggagtccaggttta
ctaggttccaagggagaacctggtgacatctttggtgctgaaagtggtgttccaggagag
cgaggcctacagggattgccaggggacagaggattgcctggagactctggctttccagga
cctaaaggtttgcctgggaagttgggcttgctaggccccaaaggtgagcggggcagccct
ggaacaccaggccatgcaggacagccaggcgccccagggcctggtggtttactcggtatc
aagggcaaacccgggctaccaggaaaaccaggctttccaggcacttcaggacatcctgga
aagaaaggcccagaaggcaagacaggtcctcctgcatcaactggaatgaaaggtctgcct
gggctgaaaggccttcctggatctttagggttaattggcttcctgggaaactcaggcttg
ccaggggccactggattgccgggcctgccgggtatgaagggtgaaaaggggtctgttgga
ctgacaggttttctagggatgccgggtctccctggtattcctggtgcaagcggattaaag
ggaattcctgggttgactggaaaagtaggaccatctggacaggctggtagccctggtgaa
aaaggagacagaggtgacccggggccagtcagaattcccagtctaagacctccaatgctg
aaccttcagttcaaaggaaacaaaggctctcggggctcagctggatccaatggatttcct
ggactcagaggtgacaaaggagaagctggccgccctggattaccaggcttgcctggagct
cctggattgcccagcacaatcaaggggcttattgggagaccaggcccccctggctctata
ggactacggggcttacctggtctgaaggggaaccctggaatctcaggcttcccaggaatg
tcaggaaaaagcggttcgcagggtctcagcggagctcctgggctccctggagcatctggc
ctcccaggttcaaaaggagatcaaggccagacacttggactttctggtagcccaggaccc
aagggacaacttggggatcctggcttggaaggtattaaagggaaagctggacttgttggt
gacataggtttccccggaattaaaggtgatgatgggaaagttggtatttctggagatgtt
ggaattcctggctccccaggatttcctgggattgcaggcatgagaggaaacccagggctt
cctggttctccgggccacccagggacacctgggcccctgggacttcctggtctaatagga
accaaaggttatcctggagttcttggtttgcatggattaaatgggcttccaggaaccaag
ggcacccatggaactccaggacctagtataatcggtgtgccagggccagctggcctgcct
ggtcccaaaggcgaaaaaggttctctgggaattagcactggagccccagggaagccaggc
ataaaagggccaaaaggtggccgaggtttcccaggtctccagggccctgctggtcccccc
ggtgccccagccctctctttgccctcagtcatagcaggacagcctggtgaccctgggcga
ccaggcctagatggagaacgaggccgcccaggtcccccaggtcccctaggtccccctgga
ccatcctcggatcaaggcgactctggagaccctggctttcctggaattcctggccctaaa
gggcctaagggaggccaaggaattccaggtttctctggcctccctggagagctaggactg
aaaggcctgagaggtgagcctggcttcatggggactccaggcaaggttggggcacctgga
gacccaggatttcccggaatgaaggggaaggcagggccaagaggtgagttcagaacatat
gctaggctgatcctgagcttgagggagggggagcatacacagcatggagatgctggacaa
agggatgattcacatcttgggcaggatggagcagttggtgcaagatttcatcatgatact
cagaacggacctccagggaaacagggtcccttcgggagggctggattgcctggacagagc
gtgagagtgggctacaccttggtgaagcacagccagtcacaacaggtgcctctgtgccct
gcggggatgacccagctgtgggtgggttacagcttgctgttcgtggaggggcaggagaaa
gcccacaatcaggacttggggtttgctggctcctgcttgccccgattcagcaccatgccc
ttcatctactgcaacatcaacgaagtgtgccactatgccaggcgcaatgataaatcctac
tggctctccaccaccgcccccatccccatgatgcctattggccagacacagatcccccag
tacatcagccgctgctcagtgtgtgaagctccctcacaagccattgctgtgcacagccag
gacatcaccatcccgcagtgccccctgggctggcgcagcctctggatcgggtactccttc
ctcatgcacacggccgctggcaccgagggtggaggccagtccttggtttcacctggctcc
tgcctagaggattttcgcaccactccttttattgagtgcaatggtgcccggggcacctgc
cactactttgccaacaagtacagtttctggttgacgacagtggaggagagacagcagttt
ggggaggaacctgtgcctgaaacactgaaagctgggcagcttcacactcgggtcagccgc
tgccaggtgtgtatgaaaagcctgtag
DBGET
integrated database retrieval system
