Pteropus vampyrus (Indian flying fox): 120616468
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Entry
120616468 CDS
T07511
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120616468 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120616468 (CNOT3)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120616468 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120616468 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
120616468
NCBI-ProteinID:
XP_039735778
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTTTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALA
ATSPPSHSHMEDEVFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSSQHPQSPAVPPSYPPGPLPAASALSTTSGNNGAPAPAAPPSALGPKASP
APSHNSGTPAPYAQAVAPPAPSGPSAAQPRPPSVQPGGGGGAGSNSSNSSGGGGASKQNG
ATSYSSVVADSPAEVALSSSGGNNASSQALGPPSGPHNPPPSTSKEPTAAAPASAGGVTP
GSGNNAGGPSLLVPLPVNPPSSPTPSFSEAKAGGALLNGPPQFSTAPEIKAPEPLSSLKS
MAERAAISSGIEDPVPTLHLTERDIIISNTSAPPASAQPPLQLSEVNIPLSLGVCPLGPV
PLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQR
LSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYI
YFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaagtgtccgag
ggtgtcgagcagttcgaagatatttggcagaagctccacaatgctgccaacgcgaaccag
aaggaaaagtatgaggctgacctgaagaaggagattaagaagcttcaacggctgagggac
cagatcaagacatgggtggcttccaacgagatcaaggataagaggcagctcatagataac
cgcaagctcattgagacgcaaatggagcggttcaaagttgtggagcgagagaccaaaacc
aaagcctacagcaaggagggcctgggcctggcacagaaggtggaccctgcccagaaggag
aaggaggaggttggccagtggctcacgaccaccatcgacaccctgaacatgcaggtggac
cagtttgagagtgaagtggaatctctgtcggtgcagacacgcaagaagaagggcgacaag
gaccagaagcaggaccggatcgagggcctgaagcggcacattgagaagcatcgctaccat
gtgcgcatgctagagaccatcctgcgcatgctggacaatgactccatcctggtggacgcc
atccgcaagatcaaggacgacgttgagtactacgtcgactcctcccaggaccccgacttt
gaggagaatgagtttctctacgacgacctggacctcgaggacattccacaggcgctggcc
gccacctcccctcccagccacagtcacatggaggacgaggtcttcaaccagtcaagcagc
acgcccacctccaccacctccagctcacccatcccgcccagcccggccaactgcaccacg
gaaaactctgaagatgacaagaagagagggcgctcaacagatagtgaagtcagccagtct
cccgccaaaaatggctccaagcccgtccacagcagccagcaccctcagtccccagctgtg
ccgcccagctacccacctggccccctgcctgctgcctctgccctgagcaccacctctggc
aataatggggcccctgccccggcagcacccccaagtgccctgggccccaaggccagccca
gctcccagccacaactcgggcaccccagccccctacgcccaggctgtggccccaccagcc
cccagtgggcccagtgctgcccagcctcggcctcccagcgtccagcccggcgggggaggt
ggtgcaggcagcaacagcagtaacagcagtggaggtggaggtgccagcaagcagaacggt
gccaccagttacagctcagtcgtggcagacagcccggcagaggtggctctcagcagcagt
gggggcaacaacgctagcagccaggctctgggacccccatctggcccccacaacccaccc
cccagcacctcgaaggaacccactgcagctgccccagcaagtgctggaggtgtgactcca
ggctcagggaacaacgccgggggacccagcctcctggtgccacttcctgtgaaccctccc
agctccccgacgcccagcttcagtgaagccaaggcaggtggtgccctgctcaatggaccc
ccgcagttcagcactgccccggaaatcaaggcccctgagcctctgagctctctgaagtcc
atggcagagcgagcagccatcagctccggcattgaggatccagtgccaacgctgcacctg
accgagagagacatcatcatcagcaacacatcagcccctccagcctcggcccaaccgccc
ctgcagctatcggaggtgaacataccattgtcactgggggtgtgtccactggggccagtg
cctctcaccaaggagcagctctaccagcaggccatggaagaggccgcatggcaccacatg
cctcacccctcagactctgagcgcatcaggcagtacctgccccggaacccctgcccgacg
cccccctaccaccaccagatgcctcccccgcactcggacactgtggagttctaccagcgc
ctgtccaccgagaccctcttcttcatcttctactatctggagggcactaaggcgcagtac
cttgcggccaaggcactgaagaagcagtcgtggcggttccacaccaagtatatgatgtgg
ttccagaggcacgaggagcccaagaccatcactgacgagttcgagcagggcacctacatc
tactttgactacgagaagtggggccagcggaagaaggaaggcttcacctttgagtaccgc
tacctggaggaccgggacctccagtga
DBGET
integrated database retrieval system
