Pteropus vampyrus (Indian flying fox): 120616574
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Entry
120616574 CDS
T07511
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41 isoform X1
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
120616574 (DDX41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgig03041
]
120616574 (DDX41)
Enzymes [BR:
pgig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120616574 (DDX41)
Spliceosome [BR:
pgig03041
]
Complex C
Other components
Complex C specific factors
120616574 (DDX41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
120616574
NCBI-ProteinID:
XP_039736058
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MEESEPERKRARTDEATAVGSRSEAEDEDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAEE
EQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVA
EGRALMSVKEMAKGITYDDPIKTSWTPPCYVLNMSEERHERVRKKYHILVEGDGIPPPIK
SFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM
FCLEQEKRLPFSKREGPYGLIICPSRELARQTHSILEYYCRLLQEDSSPLLRCALCIGGM
SVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTI
FSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKM
VYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREG
KKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACD
ESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAM
QTKQVSNIGRKDYLAHSSMDF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtcggaacccgagcggaagcgggctcgcactgacgaggcgactgctgtagga
agccgctccgaggcggaggatgaagacgaggactacgtgccctacgtaccgttgcggcag
cgccgacagctgctgctccagaagctgctgcagcgcaggcgcaagggagcagcagaggag
gagcagcaggacagcggcagtgagccccggggagatgaggacgacatcccgctgggccct
cagtccaacgtgagcctcctggatcagcaccagcacctcaaagagaaggcggaagcccgc
aaggagtctgccaaggagaagcagttgaaggaagaggagaagatcctggagagtgtggcg
gagggccgagccttgatgtcagtgaaggaaatggccaagggaatcacatacgacgatcca
atcaaaaccagttggacaccaccctgttatgtcctgaacatgtccgaagagcggcatgag
cgggtacggaagaagtaccacatcctggtggaaggagatggtatcccgccacccatcaaa
agcttcaaggaaatgaaatttcctgcagccatcctgagaggcctgaagaagaaaggcatc
caccacccaacaccaattcaaatccagggcatccctaccattctatctggccgtgacatg
ataggcattgctttcacgggttcaggcaaaacgctggtgttcactttgccggttatcatg
ttctgcctggaacaggagaagaggttacctttctctaagcgcgaagggccctatggactc
attatctgcccctcgcgagagctggcccggcaaacccacagcatcctggagtattactgt
cgtttgctacaggaagacagctcgccactcctgcgctgcgcactctgcattgggggcatg
tctgtcaaagagcagatggagaccatccggcatggtgtgcacatgatggttgccacccct
gggcgcctgatggatctgctgcaaaagaagatggtcagcctagacatctgtcgctacctg
gctctggacgaggctgaccgcatgatcgacatgggcttcgagggtgacatccgcaccatc
ttctcctacttcaagggccaacggcagaccctactcttcagtgccaccatgcctaagaag
atacagaactttgccaagagtgccctggtaaagcctgtcaccatcaacgtggggcgcgcc
ggggccgccagcctggacgtcatccaggaggtggaatatgtaaaggaggaggccaagatg
gtgtacctgctcgagtgcctgcaaaagaccccgccgcccgtgctcatctttgcagagaag
aaggcagatgtggatgccatccacgagtatctgctgctcaagggggtcgaggctgtggcc
attcatggtggcaaagaccaggaggaacggaccaaggccatcgaggcattccgggagggg
aagaaggatgtcctagtggccacagacgtagcctccaagggcctggacttccctgccatc
cagcatgtcatcaattacgacatgcctgaggagatcgagaactatgtgcacagaattggc
cgtactgggcgctcaggaaacacaggcatcgccaccactttcatcaacaaggcctgtgat
gagtcggtgctgatggacctcaaagccctactgttggaggccaagcagaaggtgccacct
gtgctgcaagtactacattgcggggacgagtccatgctggacatcggaggagaacgcggc
tgtgccttctgcgggggcctgggccatcggatcaccgactgccccaaactcgaggccatg
caaaccaagcaggtcagcaacattggccgcaaagactacctggctcacagctccatggac
ttctag
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