Pteropus vampyrus (Indian flying fox): 120618189
Help
Entry
120618189 CDS
T07511
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120618189 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgig03041
]
120618189 (PRPF40B)
Spliceosome [BR:
pgig03041
]
Complex A
U1 snRNP components
U1 related factors
120618189 (PRPF40B)
Complex B
120618189 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
120618189
NCBI-ProteinID:
XP_039738031
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MKMTLKGFGQLALGWWKREQTYPGLRVGGRQEIELRDPSSELCAPFSASPLCFPFAKTHL
FAHPGSYDFSLPQQSVPDSGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMGLPPVS
QRPPAIPPMPPGIMPPMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTAS
SAVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSD
TGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAVGKQQQQQPPQTLQPQPPQPQPDPPPV
PPGPTPMPMGLLEPEPGGSEDCDVSDAAQPLEQGFLLQPEEGPSSSTGQHQPPQQEEEES
RPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQ
AFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVV
PERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMD
NPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLD
ELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKII
KDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEE
ARRLRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQV
LETECQHLHTKGRKHSRKGKKHHHKRSHSPSGSESEEEEPPPPSLRPPKRRRRNPSESGS
EPSSSLDSVESGGAALGGRSSPSSRLLLGSDHGLRKAKKPKKKTKKRRHKSNSPESETDP
EEKAGKESDEKEPEQDKDRELRLAELPNRSPGFGIKKEKTGWDTSESELSEGELERRRRT
LLQQLDDHQ
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgacattgaaggggtttggccagctggctctgggctggtggaagagagagcag
acctacccagggctcagagttgggggtaggcaggaaattgagcttagagacccttcctct
gaactttgtgctcctttttcagcttcacccctctgcttcccttttgcaaaaacccatctc
tttgcccatcctgggtcctatgacttttctctccctcaacagtcggttcccgattctggt
ccccggcccccagcagcgcctgcccccttcccaccggggccccccatgatgccaccaccc
ttcatgccccctccaggaatccccccaccctttcctccaatggggctaccccccgtgagt
cagagaccaccagccatcccccctatgccacctggaatcatgcccccaatgcttccacca
atgggggcaccaccaccactcacacagataccaggaatggtacctcccatgatgccagga
atgctgatgccagcagtgcctgtcaccgcagcgacggctccgggtgcggacaccgccagc
tctgctgtggctgggacaggccctccgagggccctatggagtgagcatgtggcccctgac
gggcgcatctactactacaatgctgacgacaagcagtccgtgtgggagaagcccagcgtg
ctcaagtccaaggcggagttgttgctgtctcagtgtccctggaaagagtacaaatcggat
acaggcaaaccttattactataacaaccagagtaaggagtcccgctggacccggcccaag
gacctggatgacctggaggctctagtcaaacaagaggctgtagggaaacagcagcagcag
cagccaccacagacactgcagccgcagcctcctcagccacagcctgaccccccacctgtg
cctcctggccctaccccaatgcccatgggcctcctagaacctgagccaggtgggagtgaa
gattgcgatgtgtcagatgctgcccagcccctggaacaggggttcctactgcagccagag
gagggccccagcagttctactggacagcatcagccgccacagcaggaggaagaggaatca
aggccagaaccagagaggtctggcctcagttggagcaaccgggagaaggcaaagcaggcc
tttaaggagctgctgagggacaaggctgtcccctccaacgcatcatgggaacaggccatg
aagatggtggtcaccgacccccgttacagtgccttgcccaaactgagtgagaaaaagcag
gcattcaatgcctacaaggcgcagcgggagaaggaggagaaggaagaggcccgactaagg
gccaaggaggccaagcagaccttgcagcacttcctggagcagcatgagcgcatgacctcc
accacccgctaccggcgggcagaacagacctttggggagctggaggtctgggctgtggtt
cctgagagggatcgaaaagaggtttatgatgatgtcctcttcttcctggccaagaaggag
aaggaacaggccaagcagctccgacgccgtaacatccaggccctgaagagcatcctggat
gggatgagtagcgtcaacttccaaacgacatggtcccaggcccagcagtacctcatggat
aaccccagctttgctcaggaccatcagcttcagaacatggacaaggaagatgcactgatc
tgctttgaggagcacatccgagctttggagagggaggaggaggaggagcgggagcgagcc
cggcttcgggagcggcgccagcaacgcaagaaccgggaggccttccagaccttcctggac
gagctgcacgagacagggcagctgcactccatgtccacctggatggagctgtacccagcg
gtcagcactgatgtccgctttgccaacatgctgggccagccgggctccacccctttggac
ttgttcaagttctatgtggaggagttgaaggcacgattccatgatgagaagaagatcatt
aaggacatccttaaggaccggggcttctgtgtggaggtgaacacagcctttgaggacttc
gcccacgtcataagctttgacaagagggctgctgcgctggacgcaggcaacatcaagctg
accttcaatagtctgctggagaaagcagaggctcgggagagagagcgggagaaggaggag
gcacgaaggctgcggcgcagggaagctgcctttcgaagcatgctgaggcaggccgtgcct
gctctggagctgggcactgcctgggaagaggtccgtgagcgctttgtgtgcgactcagcc
tttgagcagatcaccctggagtcggagcggatccggctcttccgggagttcctgcaggta
ctggagactgaatgccagcacctccacaccaaaggccgaaagcacagcagaaagggcaag
aagcaccatcacaagcgttcccactcaccctcaggctccgagtcggaagaggaggagcca
cccccaccgtctctccggccccccaagcggaggcggcggaacccctctgagtctggctct
gagccctcttcctcacttgattcagttgaaagtgggggtgctgcccttggaggacggagc
tccccatcctcccgccttctccttggatcagatcatggccttcggaaagccaagaaacca
aaaaagaaaactaagaagagaagacacaagtcgaacagtcctgagagtgagacagatcct
gaggagaaagctggcaaggagagtgatgagaaagaaccagaacaggacaaggacagggag
ctccgactggcagagctccctaaccgctccccaggttttggaatcaagaaggagaagacg
ggctgggacacgtcagaaagtgagctgagcgagggtgagctggaaaggcggcggcggaca
ctcctgcagcagctggatgaccaccagtga
DBGET
integrated database retrieval system
